core::io::NomenclatureManager Member List

This is the complete list of members for core::io::NomenclatureManager, including all inherited members.

achiral_set() const	core::io::NomenclatureManager	inlineprivate
achiral_set_	core::io::NomenclatureManager	private
alt_codes_	core::io::NomenclatureManager	private
annotated_seq_from_IUPAC_map_	core::io::NomenclatureManager	private
annotated_seq_from_modomics_map_	core::io::NomenclatureManager	private
annotated_sequence_from_IUPAC_sequence(std::string const &seq)	core::io::NomenclatureManager	static
annotated_sequence_from_modomics_oneletter_sequence(std::string const &seq)	core::io::NomenclatureManager	static
d_aa_set() const	core::io::NomenclatureManager	inlineprivate
d_aa_set_	core::io::NomenclatureManager	private
decide_is_d_aa(std::string const &name3)	core::io::NomenclatureManager	static
decide_is_known_achiral(std::string const &name3)	core::io::NomenclatureManager	static
decide_is_l_aa(std::string const &name3)	core::io::NomenclatureManager	static
default_mainchain_connectivity_from_pdb_code(std::string const &pdb_code)	core::io::NomenclatureManager	static
find_alternate_codes_file(std::string const &filename)	core::io::NomenclatureManager	private
get_alternate_3_letter_code_map() const	core::io::NomenclatureManager	private
is_metal(std::string const &name3)	core::io::NomenclatureManager	static
is_NA(std::string const &name3)	core::io::NomenclatureManager	static
is_NA_	core::io::NomenclatureManager	private
is_old_DNA(std::string const &name3)	core::io::NomenclatureManager	static
is_old_DNA_	core::io::NomenclatureManager	private
is_old_RNA(std::string const &name3)	core::io::NomenclatureManager	static
is_old_RNA_	core::io::NomenclatureManager	private
is_sugar(std::string const &name3)	core::io::NomenclatureManager	static
iupac_map() const	core::io::NomenclatureManager	inlineprivate
l_aa_set() const	core::io::NomenclatureManager	inlineprivate
l_aa_set_	core::io::NomenclatureManager	private
metal_set() const	core::io::NomenclatureManager	inlineprivate
metal_set_	core::io::NomenclatureManager	private
modomics_map() const	core::io::NomenclatureManager	inlineprivate
na_set() const	core::io::NomenclatureManager	inlineprivate
NomenclatureManager()	core::io::NomenclatureManager	private
old_dna_set() const	core::io::NomenclatureManager	inlineprivate
old_rna_set() const	core::io::NomenclatureManager	inlineprivate
pdb_code_from_rosetta_name(std::string const &rosetta_name)	core::io::NomenclatureManager	static
rosetta_names_from_pdb_code(std::string const &pdb_code)	core::io::NomenclatureManager	static
sugar_set() const	core::io::NomenclatureManager	inlineprivate
sugar_set_	core::io::NomenclatureManager	private
utility::SingletonBase< NomenclatureManager > class	core::io::NomenclatureManager	friend