protocols::flexpep_docking::FlexPepDockingFlags Member List

This is the complete list of members for protocols::flexpep_docking::FlexPepDockingFlags, including all inherited members.

backrub_opt	protocols::flexpep_docking::FlexPepDockingFlags
boost_fa_atr	protocols::flexpep_docking::FlexPepDockingFlags
clone() const	protocols::flexpep_docking::FlexPepDockingFlags	inline
design_peptide	protocols::flexpep_docking::FlexPepDockingFlags
dumpPDB_abinitio	protocols::flexpep_docking::FlexPepDockingFlags
dumpPDB_hires	protocols::flexpep_docking::FlexPepDockingFlags
dumpPDB_lowres	protocols::flexpep_docking::FlexPepDockingFlags
extend	protocols::flexpep_docking::FlexPepDockingFlags
FlexPepDockingFlags()	protocols::flexpep_docking::FlexPepDockingFlags
frag3_weight	protocols::flexpep_docking::FlexPepDockingFlags
frag5_weight	protocols::flexpep_docking::FlexPepDockingFlags
frag9_weight	protocols::flexpep_docking::FlexPepDockingFlags
hb_filter	protocols::flexpep_docking::FlexPepDockingFlags
hotspot_filter	protocols::flexpep_docking::FlexPepDockingFlags
is_ligand_present(core::pose::Pose const &pose) const	protocols::flexpep_docking::FlexPepDockingFlags
lowres_abinitio	protocols::flexpep_docking::FlexPepDockingFlags
lowres_preoptimize	protocols::flexpep_docking::FlexPepDockingFlags
mcm_cycles	protocols::flexpep_docking::FlexPepDockingFlags
min_only	protocols::flexpep_docking::FlexPepDockingFlags
min_receptor_bb	protocols::flexpep_docking::FlexPepDockingFlags
no_prepack1	protocols::flexpep_docking::FlexPepDockingFlags
no_prepack2	protocols::flexpep_docking::FlexPepDockingFlags
params_file	protocols::flexpep_docking::FlexPepDockingFlags
pep_fold_only	protocols::flexpep_docking::FlexPepDockingFlags
pep_refine	protocols::flexpep_docking::FlexPepDockingFlags
peptide_anchors	protocols::flexpep_docking::FlexPepDockingFlags
peptide_chain() const	protocols::flexpep_docking::FlexPepDockingFlags
peptide_chain_	protocols::flexpep_docking::FlexPepDockingFlags	private
peptide_cuts	protocols::flexpep_docking::FlexPepDockingFlags
peptide_first_res() const	protocols::flexpep_docking::FlexPepDockingFlags
peptide_first_res_	protocols::flexpep_docking::FlexPepDockingFlags	private
peptide_last_res() const	protocols::flexpep_docking::FlexPepDockingFlags
peptide_loop_model	protocols::flexpep_docking::FlexPepDockingFlags
peptide_nres() const	protocols::flexpep_docking::FlexPepDockingFlags
peptide_nres_	protocols::flexpep_docking::FlexPepDockingFlags	private
place_peptide	protocols::flexpep_docking::FlexPepDockingFlags
ppk_only	protocols::flexpep_docking::FlexPepDockingFlags
pSer2Asp_centroid	protocols::flexpep_docking::FlexPepDockingFlags
pSer2Glu_centroid	protocols::flexpep_docking::FlexPepDockingFlags
ramp_fa_rep	protocols::flexpep_docking::FlexPepDockingFlags
ramp_rama	protocols::flexpep_docking::FlexPepDockingFlags
random_phi_psi_pert	protocols::flexpep_docking::FlexPepDockingFlags
random_phi_psi_pert_size	protocols::flexpep_docking::FlexPepDockingFlags
randomRBstart	protocols::flexpep_docking::FlexPepDockingFlags
rb_rot_size	protocols::flexpep_docking::FlexPepDockingFlags
rb_trans_size	protocols::flexpep_docking::FlexPepDockingFlags
rbMCM	protocols::flexpep_docking::FlexPepDockingFlags
recal_foldtree	protocols::flexpep_docking::FlexPepDockingFlags
receptor_anchor_pos	protocols::flexpep_docking::FlexPepDockingFlags
receptor_chain() const	protocols::flexpep_docking::FlexPepDockingFlags
receptor_chain_	protocols::flexpep_docking::FlexPepDockingFlags	private
receptor_first_res() const	protocols::flexpep_docking::FlexPepDockingFlags
receptor_first_res_	protocols::flexpep_docking::FlexPepDockingFlags	private
receptor_last_res() const	protocols::flexpep_docking::FlexPepDockingFlags
receptor_nres() const	protocols::flexpep_docking::FlexPepDockingFlags
receptor_nres_	protocols::flexpep_docking::FlexPepDockingFlags	private
ref_start_struct() const	protocols::flexpep_docking::FlexPepDockingFlags
ref_start_struct_	protocols::flexpep_docking::FlexPepDockingFlags	private
rep_ramp_cycles	protocols::flexpep_docking::FlexPepDockingFlags
sample_pc	protocols::flexpep_docking::FlexPepDockingFlags
score_filter	protocols::flexpep_docking::FlexPepDockingFlags
score_only	protocols::flexpep_docking::FlexPepDockingFlags
set_peptide_chain(char ch)	protocols::flexpep_docking::FlexPepDockingFlags	inline
set_receptor_chain(std::string ch)	protocols::flexpep_docking::FlexPepDockingFlags	inline
set_user_defined_peptide(bool state)	protocols::flexpep_docking::FlexPepDockingFlags	inline
set_user_defined_receptor(bool state)	protocols::flexpep_docking::FlexPepDockingFlags	inline
setDefaultAnchors(core::pose::Pose &pose)	protocols::flexpep_docking::FlexPepDockingFlags
slideintocontact	protocols::flexpep_docking::FlexPepDockingFlags
smove_angle_range	protocols::flexpep_docking::FlexPepDockingFlags
torsionsMCM	protocols::flexpep_docking::FlexPepDockingFlags
updateChains(core::pose::Pose const &pose)	protocols::flexpep_docking::FlexPepDockingFlags
updateChainsAndAnchors_fromParamsFile(std::string const &params_file)	protocols::flexpep_docking::FlexPepDockingFlags
user_defined_peptide_chain() const	protocols::flexpep_docking::FlexPepDockingFlags	inline
user_defined_receptor_chain() const	protocols::flexpep_docking::FlexPepDockingFlags	inline
user_set_peptide_chain_	protocols::flexpep_docking::FlexPepDockingFlags	private
user_set_receptor_chain_	protocols::flexpep_docking::FlexPepDockingFlags	private
valid_anchors() const	protocols::flexpep_docking::FlexPepDockingFlags	inline
valid_chain_bounds_	protocols::flexpep_docking::FlexPepDockingFlags	private
valid_chain_info() const	protocols::flexpep_docking::FlexPepDockingFlags	inline
valid_peptide_chain() const	protocols::flexpep_docking::FlexPepDockingFlags	inline
valid_peptide_chain_	protocols::flexpep_docking::FlexPepDockingFlags	private
valid_receptor_chain() const	protocols::flexpep_docking::FlexPepDockingFlags	inline
valid_receptor_chain_	protocols::flexpep_docking::FlexPepDockingFlags	private
valid_ref_start_struct() const	protocols::flexpep_docking::FlexPepDockingFlags
valid_ref_start_struct_	protocols::flexpep_docking::FlexPepDockingFlags	private