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protocols::pdbinfo_manipulations::AlignPDBInfoToSequences Member List

This is the complete list of members for protocols::pdbinfo_manipulations::AlignPDBInfoToSequences, including all inherited members.

AlignPDBInfoToSequences()protocols::pdbinfo_manipulations::AlignPDBInfoToSequences
AlignPDBInfoToSequences(AlignPDBInfoToSequences const &src)protocols::pdbinfo_manipulations::AlignPDBInfoToSequences
apply(core::pose::Pose &pose) overrideprotocols::pdbinfo_manipulations::AlignPDBInfoToSequencesvirtual
apply_multi_sequence(core::pose::Pose &pose)protocols::pdbinfo_manipulations::AlignPDBInfoToSequencesprivate
apply_single_sequence(core::pose::Pose &pose)protocols::pdbinfo_manipulations::AlignPDBInfoToSequencesprivate
clear_info()protocols::moves::Moverinlinevirtual
clone() const overrideprotocols::pdbinfo_manipulations::AlignPDBInfoToSequencesvirtual
create()protocols::moves::Movervirtual
fresh_instance() const overrideprotocols::pdbinfo_manipulations::AlignPDBInfoToSequencesvirtual
get_additional_output()protocols::moves::Movervirtual
get_current_job() const protocols::moves::Mover
get_current_tag() const protocols::moves::Moverinline
get_input_pose() const protocols::moves::Mover
get_last_move_status() const protocols::moves::Mover
get_mode() const protocols::pdbinfo_manipulations::AlignPDBInfoToSequencesinline
get_mode_as_string() const protocols::pdbinfo_manipulations::AlignPDBInfoToSequences
get_name() const overrideprotocols::pdbinfo_manipulations::AlignPDBInfoToSequencesvirtual
get_native_pose() const protocols::moves::Mover
get_self_ptr() const protocols::moves::Moverinline
get_self_ptr()protocols::moves::Moverinline
get_self_weak_ptr() const protocols::moves::Moverinline
get_self_weak_ptr()protocols::moves::Moverinline
get_sequence_alignment_cut_max() const protocols::pdbinfo_manipulations::AlignPDBInfoToSequencesinline
get_target_sequences() const protocols::pdbinfo_manipulations::AlignPDBInfoToSequencesinline
get_target_sequences()protocols::pdbinfo_manipulations::AlignPDBInfoToSequencesinline
get_throw_on_fail() const protocols::pdbinfo_manipulations::AlignPDBInfoToSequencesinline
get_type() const protocols::moves::Moverinline
info()protocols::moves::Moverinlinevirtual
info() const protocols::moves::Moverinlinevirtual
last_proposal_density_ratio()protocols::moves::Moverinlinevirtual
load_json_file(std::string const &json_fn)protocols::pdbinfo_manipulations::AlignPDBInfoToSequences
mode_protocols::pdbinfo_manipulations::AlignPDBInfoToSequencesprivate
Mover()protocols::moves::Mover
Mover(std::string const &type_name)protocols::moves::Mover
mover_name()protocols::pdbinfo_manipulations::AlignPDBInfoToSequencesstatic
name()protocols::moves::Moverinlinestatic
operator=(AlignPDBInfoToSequences const &src)protocols::pdbinfo_manipulations::AlignPDBInfoToSequences
parse_my_tag(utility::tag::TagCOP tag, basic::datacache::DataMap &) overrideprotocols::pdbinfo_manipulations::AlignPDBInfoToSequencesvirtual
parse_target_tag(utility::tag::TagCOP const &tag) const protocols::pdbinfo_manipulations::AlignPDBInfoToSequences
Pose typedefprotocols::moves::Mover
PoseCOP typedefprotocols::moves::Mover
provide_citation_info(basic::citation_manager::CitationCollectionList &) const protocols::moves::Movervirtual
provide_xml_schema(utility::tag::XMLSchemaDefinition &xsd)protocols::pdbinfo_manipulations::AlignPDBInfoToSequencesstatic
register_options()protocols::moves::Moverinlinestatic
reinitialize_for_each_job() const protocols::moves::Movervirtual
reinitialize_for_new_input() const protocols::moves::Movervirtual
reset_status()protocols::moves::Mover
sequence_alignment_cut_max_protocols::pdbinfo_manipulations::AlignPDBInfoToSequencesprivate
set_current_job(protocols::jobdist::BasicJobCOP job)protocols::moves::Mover
set_current_tag(std::string const &new_tag)protocols::moves::Moverinlinevirtual
set_input_pose(PoseCOP pose)protocols::moves::Movervirtual
set_last_move_status(MoverStatus status)protocols::moves::Moverprotected
set_mode(AlignPDBInfoToSequencesMode const &mode)protocols::pdbinfo_manipulations::AlignPDBInfoToSequencesinline
set_mode_from_string(std::string const &mode)protocols::pdbinfo_manipulations::AlignPDBInfoToSequences
set_native_pose(PoseCOP pose)protocols::moves::Movervirtual
set_sequence_alignment_cut_max(core::Size const sequence_alignment_cut_max)protocols::pdbinfo_manipulations::AlignPDBInfoToSequencesinline
set_target_sequences(utility::vector1< SequenceSpecification > const &target_sequences)protocols::pdbinfo_manipulations::AlignPDBInfoToSequencesinline
set_throw_on_fail(bool const throw_on_fail)protocols::pdbinfo_manipulations::AlignPDBInfoToSequencesinline
set_type(std::string const &setting)protocols::moves::Moverinline
show(std::ostream &output=std::cout) const overrideprotocols::pdbinfo_manipulations::AlignPDBInfoToSequencesvirtual
Strings typedefprotocols::moves::Mover
TagCOP typedefprotocols::moves::Mover
target_sequences_protocols::pdbinfo_manipulations::AlignPDBInfoToSequencesprivate
test_move(Pose &pose)protocols::moves::Moverinlinevirtual
throw_on_fail_protocols::pdbinfo_manipulations::AlignPDBInfoToSequencesprivate
type(const std::string &type_in)protocols::moves::Moverinline
type() const protocols::moves::Moverinline
~AlignPDBInfoToSequences() overrideprotocols::pdbinfo_manipulations::AlignPDBInfoToSequences
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