protocols::stepwise::modeler::align::StepWiseLegacyClusterer Member List

This is the complete list of members for protocols::stepwise::modeler::align::StepWiseLegacyClusterer, including all inherited members.

auto_tune_	protocols::stepwise::modeler::align::StepWiseLegacyClusterer	private
calc_rms_res_	protocols::stepwise::modeler::align::StepWiseLegacyClusterer	private
check_for_closeness(core::pose::PoseOP rms_pose)	protocols::stepwise::modeler::align::StepWiseLegacyClusterer	private
cluster()	protocols::stepwise::modeler::align::StepWiseLegacyClusterer
cluster_by_all_atom_rmsd_	protocols::stepwise::modeler::align::StepWiseLegacyClusterer	private
cluster_radius_	protocols::stepwise::modeler::align::StepWiseLegacyClusterer	private
cluster_rmsds_to_try_with_auto_tune_	protocols::stepwise::modeler::align::StepWiseLegacyClusterer	private
cluster_with_auto_tune()	protocols::stepwise::modeler::align::StepWiseLegacyClusterer	private
corresponding_atom_id_map_	protocols::stepwise::modeler::align::StepWiseLegacyClusterer	private
do_some_clustering()	protocols::stepwise::modeler::align::StepWiseLegacyClusterer	private
force_align_	protocols::stepwise::modeler::align::StepWiseLegacyClusterer	private
get_pose_list()	protocols::stepwise::modeler::align::StepWiseLegacyClusterer	inline
hit_score_cutoff_	protocols::stepwise::modeler::align::StepWiseLegacyClusterer	private
initialize_auto_tune_cluster_rmsds()	protocols::stepwise::modeler::align::StepWiseLegacyClusterer	private
initialize_cluster_list()	protocols::stepwise::modeler::align::StepWiseLegacyClusterer	private
initialize_corresponding_atom_id_map(core::pose::Pose const &pose)	protocols::stepwise::modeler::align::StepWiseLegacyClusterer	private
initialize_parameters_and_input()	protocols::stepwise::modeler::align::StepWiseLegacyClusterer	private
initialized_atom_id_map_for_rmsd_	protocols::stepwise::modeler::align::StepWiseLegacyClusterer	private
input_pose_counter_	protocols::stepwise::modeler::align::StepWiseLegacyClusterer	private
input_pose_list_	protocols::stepwise::modeler::align::StepWiseLegacyClusterer	private
max_decoys_	protocols::stepwise::modeler::align::StepWiseLegacyClusterer	private
num_pose_in_cluster_	protocols::stepwise::modeler::align::StepWiseLegacyClusterer	private
output_pose_list_	protocols::stepwise::modeler::align::StepWiseLegacyClusterer	private
recluster_current_pose_list()	protocols::stepwise::modeler::align::StepWiseLegacyClusterer	private
rename_tags_	protocols::stepwise::modeler::align::StepWiseLegacyClusterer	private
rms_pose_list()	protocols::stepwise::modeler::align::StepWiseLegacyClusterer	inline
rms_pose_list_	protocols::stepwise::modeler::align::StepWiseLegacyClusterer	private
score_diff_cut_	protocols::stepwise::modeler::align::StepWiseLegacyClusterer	private
score_min_	protocols::stepwise::modeler::align::StepWiseLegacyClusterer	private
set_auto_tune(bool const auto_tune)	protocols::stepwise::modeler::align::StepWiseLegacyClusterer	inline
set_calc_rms_res(utility::vector1< core::Size > const &calc_rms_res)	protocols::stepwise::modeler::align::StepWiseLegacyClusterer
set_cluster_by_all_atom_rmsd(core::Real const &setting)	protocols::stepwise::modeler::align::StepWiseLegacyClusterer	inline
set_cluster_radius(core::Real const &setting)	protocols::stepwise::modeler::align::StepWiseLegacyClusterer	inline
set_force_align(bool const force_align)	protocols::stepwise::modeler::align::StepWiseLegacyClusterer	inline
set_max_decoys(core::Size const &setting)	protocols::stepwise::modeler::align::StepWiseLegacyClusterer	inline
set_rename_tags(core::Real const &setting)	protocols::stepwise::modeler::align::StepWiseLegacyClusterer	inline
set_score_diff_cut(core::Real const &setting)	protocols::stepwise::modeler::align::StepWiseLegacyClusterer	inline
setup_silent_struct(core::Size const n)	protocols::stepwise::modeler::align::StepWiseLegacyClusterer	private
StepWiseLegacyClusterer(utility::vector1< core::pose::PoseOP > const &pose_list)	protocols::stepwise::modeler::align::StepWiseLegacyClusterer
StepWiseLegacyClusterer(utility::vector1< core::pose::PoseOP > const &pose_list, utility::vector1< core::Size > const &moving_res_list, options::StepWiseModelerOptionsCOP options, bool const force_align)	protocols::stepwise::modeler::align::StepWiseLegacyClusterer
~StepWiseLegacyClusterer() override	protocols::stepwise::modeler::align::StepWiseLegacyClusterer