| describe_score(FragmentCandidateOP, FragmentScoreMapOP, std::ostream &) | protocols::frag_picker::scores::SecondaryIdentity | |
| FragmentScoringMethod(core::Size priority, core::Real lowest_acceptable_value, bool use_lowest, std::string name) | protocols::frag_picker::scores::FragmentScoringMethod | inline |
| get_id() | protocols::frag_picker::scores::FragmentScoringMethod | inline |
| get_min_allowed_score() | protocols::frag_picker::scores::FragmentScoringMethod | inline |
| get_prediction_name() | protocols::frag_picker::scores::SecondaryIdentity | inline |
| get_priority() | protocols::frag_picker::scores::FragmentScoringMethod | inline |
| get_score_name() | protocols::frag_picker::scores::FragmentScoringMethod | inline |
| get_use_lowest() | protocols::frag_picker::scores::FragmentScoringMethod | inline |
| id_ | protocols::frag_picker::scores::FragmentScoringMethod | protected |
| lowest_acceptable_value_ | protocols::frag_picker::scores::FragmentScoringMethod | protected |
| name_ | protocols::frag_picker::scores::FragmentScoringMethod | protected |
| PENALTY | protocols::frag_picker::scores::SecondaryIdentity | static |
| prediction_name_ | protocols::frag_picker::scores::SecondaryIdentity | private |
| priority_ | protocols::frag_picker::scores::FragmentScoringMethod | protected |
| query_ | protocols::frag_picker::scores::SecondaryIdentity | private |
| REWARD | protocols::frag_picker::scores::SecondaryIdentity | static |
| score(FragmentCandidateOP, FragmentScoreMapOP) override | protocols::frag_picker::scores::SecondaryIdentity | virtual |
| SecondaryIdentity(core::Size priority, core::Real lowest_acceptable_value, bool use_lowest, std::string &query_secondary_structure, std::string prediction_name) | protocols::frag_picker::scores::SecondaryIdentity | inline |
| set_id(core::Size id) | protocols::frag_picker::scores::FragmentScoringMethod | inline |
| set_min_allowed_score(core::Real lowest_acceptable_value) | protocols::frag_picker::scores::FragmentScoringMethod | inline |
| use_lowest_ | protocols::frag_picker::scores::FragmentScoringMethod | protected |