| AA typedef | core::select::util::SelectResiduesByLayer | |
| angle_exponent() const | core::select::util::SelectResiduesByLayer | inline |
| angle_exponent_ | core::select::util::SelectResiduesByLayer | protected |
| angle_shift_factor() const | core::select::util::SelectResiduesByLayer | inline |
| angle_shift_factor_ | core::select::util::SelectResiduesByLayer | protected |
| burial_ | core::select::util::SelectResiduesByLayer | protected |
| cache_selection_ | core::select::util::SelectResiduesByLayer | protected |
| calc_rsd_sasa(Pose const &pose) const | core::select::util::SelectResiduesByLayer | private |
| clone() const | core::select::util::SelectResiduesByLayer | |
| compute(Pose const &pose, String const &secstruct="", bool const skip_dssp=false, bool const asu_only=false) | core::select::util::SelectResiduesByLayer | |
| dist_exponent() const | core::select::util::SelectResiduesByLayer | inline |
| dist_exponent_ | core::select::util::SelectResiduesByLayer | protected |
| dist_midpoint() const | core::select::util::SelectResiduesByLayer | inline |
| dist_midpoint_ | core::select::util::SelectResiduesByLayer | protected |
| exclude_aatypes_for_selection(utility::vector1< AA > const &aas) | core::select::util::SelectResiduesByLayer | |
| excluded_aatypes_for_selection_ | core::select::util::SelectResiduesByLayer | protected |
| initialize(Real const &burial, Real const &surface) | core::select::util::SelectResiduesByLayer | |
| is_selection_initialized() | core::select::util::SelectResiduesByLayer | inline |
| is_selection_initialized_ | core::select::util::SelectResiduesByLayer | protected |
| layer(Size const i) const | core::select::util::SelectResiduesByLayer | |
| make_rasmol_format_file(bool const b) | core::select::util::SelectResiduesByLayer | inline |
| make_rasmol_format_file_ | core::select::util::SelectResiduesByLayer | protected |
| pick_boundary_ | core::select::util::SelectResiduesByLayer | protected |
| pick_core_ | core::select::util::SelectResiduesByLayer | protected |
| pick_surface_ | core::select::util::SelectResiduesByLayer | protected |
| pore_radius(Real const ps) | core::select::util::SelectResiduesByLayer | inline |
| pore_radius_ | core::select::util::SelectResiduesByLayer | protected |
| Pose typedef | core::select::util::SelectResiduesByLayer | |
| Real typedef | core::select::util::SelectResiduesByLayer | |
| restrict_aatypes_for_selection(utility::vector1< AA > const &aas) | core::select::util::SelectResiduesByLayer | |
| restricted_aatypes_for_selection_ | core::select::util::SelectResiduesByLayer | protected |
| rsd_layer_ | core::select::util::SelectResiduesByLayer | protected |
| rsd_neighbor_denominator() const | core::select::util::SelectResiduesByLayer | inline |
| rsd_neighbor_denominator_ | core::select::util::SelectResiduesByLayer | protected |
| rsd_sasa(Size const i) const | core::select::util::SelectResiduesByLayer | |
| rsd_sasa_ | core::select::util::SelectResiduesByLayer | protected |
| sasa_core(Real const &r, String const &ss="") | core::select::util::SelectResiduesByLayer | |
| sasa_surface(Real const &r, String const &ss="") | core::select::util::SelectResiduesByLayer | |
| selected_boundary_residues() const | core::select::util::SelectResiduesByLayer | |
| selected_boundary_residues_ | core::select::util::SelectResiduesByLayer | protected |
| selected_core_residues() const | core::select::util::SelectResiduesByLayer | |
| selected_core_residues_ | core::select::util::SelectResiduesByLayer | protected |
| selected_surface_residues() const | core::select::util::SelectResiduesByLayer | |
| selected_surface_residues_ | core::select::util::SelectResiduesByLayer | protected |
| SelectResiduesByLayer() | core::select::util::SelectResiduesByLayer | |
| SelectResiduesByLayer(SelectResiduesByLayer const &src) | core::select::util::SelectResiduesByLayer | |
| SelectResiduesByLayer(bool const pick_core, bool const pick_boundary, bool const pick_surface) | core::select::util::SelectResiduesByLayer | |
| SelectResiduesByLayer(String const &pick) | core::select::util::SelectResiduesByLayer | |
| set_angle_exponent(core::Real const &val) | core::select::util::SelectResiduesByLayer | inline |
| set_angle_shift_factor(core::Real const &val) | core::select::util::SelectResiduesByLayer | inline |
| set_design_layer(bool const pick_core, bool const pick_boundary, bool const pick_surface) | core::select::util::SelectResiduesByLayer | inline |
| set_dist_exponent(core::Real const &val) | core::select::util::SelectResiduesByLayer | inline |
| set_dist_midpoint(core::Real const &val) | core::select::util::SelectResiduesByLayer | inline |
| set_rsd_neighbor_denominator(core::Real const &val) | core::select::util::SelectResiduesByLayer | inline |
| Size typedef | core::select::util::SelectResiduesByLayer | |
| String typedef | core::select::util::SelectResiduesByLayer | |
| surface_ | core::select::util::SelectResiduesByLayer | protected |
| use_sidechain_neighbors(bool const b) | core::select::util::SelectResiduesByLayer | inline |
| use_sidechain_neighbors() const | core::select::util::SelectResiduesByLayer | |
| use_sidechain_neighbors_ | core::select::util::SelectResiduesByLayer | protected |
| ~SelectResiduesByLayer() override | core::select::util::SelectResiduesByLayer | |