core::pack::rotamer_set::RotamerSubset Member List

This is the complete list of members for core::pack::rotamer_set::RotamerSubset, including all inherited members.

add_rotamer(conformation::Residue const &rotamer) override	core::pack::rotamer_set::RotamerSubset	virtual
add_rotamer_into_existing_group(conformation::Residue const &rotamer) override	core::pack::rotamer_set::RotamerSubset	virtual
BasicDataCache typedef	core::conformation::RotamerSetBase
BasicDataCacheOP typedef	core::conformation::RotamerSetBase
begin() const override	core::pack::rotamer_set::RotamerSubset	inlinevirtual
build_dependent_rotamers(RotamerSets const &rotamer_sets, pose::Pose const &pose, scoring::ScoreFunction const &scorefxn, task::PackerTask const &task, utility::graph::GraphCOP packer_neighbor_graph) override	core::pack::rotamer_set::RotamerSubset	virtual
build_pwat_rotamers(pose::Pose const &pose, core::Size resid, utility::vector1< Vector > const &new_pwat_rotset)	core::pack::rotamer_set::RotamerSubset	virtual
build_rotamers(pose::Pose const &the_pose, scoring::ScoreFunction const &scorefxn, task::PackerTask const &task, utility::graph::GraphCOP packer_neighbor_graph, bool use_neighbor_context=true) override	core::pack::rotamer_set::RotamerSubset	virtual
cached_tries_	core::pack::rotamer_set::RotamerSubset	private
compute_one_and_two_body_energies(pose::Pose const &pose, scoring::ScoreFunction const &scorefxn, task::PackerTask const &task, utility::graph::GraphCOP packer_neighbor_graph, utility::vector1< core::PackerEnergy > &one_body_energies, utility::vector1< utility::vector1< core::PackerEnergy > > &two_body_energies, utility::vector1< core::Size > &packable_neighbors) const override	core::pack::rotamer_set::RotamerSubset	virtual
compute_one_body_energies(pose::Pose const &pose, scoring::ScoreFunction const &scorefxn, task::PackerTask const &task, utility::graph::GraphCOP packer_neighbor_graph, utility::vector1< core::PackerEnergy > &energies, bool const no_update=false) const override	core::pack::rotamer_set::RotamerSubset	virtual
compute_one_body_energy_maps(pose::Pose const &pose, scoring::ScoreFunction const &scorefxn, task::PackerTask const &task, utility::graph::GraphCOP packer_neighbor_graph, utility::vector1< scoring::EnergyMap > &energies) const override	core::pack::rotamer_set::RotamerSubset	virtual
current_rotamer_copy_	core::pack::rotamer_set::RotamerSubset	private
data()	core::conformation::RotamerSetBase
data() const	core::conformation::RotamerSetBase
different_resgroup(core::chemical::ResidueType const &rt1, core::chemical::ResidueType const &rt2) const	core::pack::rotamer_set::RotamerSubset	private
different_restype(core::chemical::ResidueType const &rt1, core::chemical::ResidueType const &rt2) const	core::pack::rotamer_set::RotamerSubset	private
drop_rotamer(Size rot_id) override	core::pack::rotamer_set::RotamerSubset	virtual
drop_rotamers(utility::vector1< bool > const &rotamers_to_delete) override	core::pack::rotamer_set::RotamerSubset	virtual
drop_rotamers_by_index(utility::vector1< Size > const &rotamer_indices_to_delete) override	core::pack::rotamer_set::RotamerSubset	virtual
end() const override	core::pack::rotamer_set::RotamerSubset	inlinevirtual
get_n_residue_groups() const override	core::pack::rotamer_set::RotamerSubset	virtual
get_n_residue_types() const override	core::pack::rotamer_set::RotamerSubset	virtual
get_n_rotamers_for_residue_group(Size which_resgroup) const override	core::pack::rotamer_set::RotamerSubset	virtual
get_n_rotamers_for_residue_type(Size which_restype) const override	core::pack::rotamer_set::RotamerSubset	virtual
get_residue_group_begin(Size which_resgroup) const override	core::pack::rotamer_set::RotamerSubset	virtual
get_residue_group_index_for_rotamer(Size which_rotamer) const override	core::pack::rotamer_set::RotamerSubset	virtual
get_residue_type_begin(Size which_restype) const override	core::pack::rotamer_set::RotamerSubset	virtual
get_residue_type_index_for_rotamer(Size which_rotamer) const override	core::pack::rotamer_set::RotamerSubset	virtual
get_trie(Size method_enum_id) const override	core::pack::rotamer_set::RotamerSubset	virtual
id_for_current_rotamer() const override	core::pack::rotamer_set::RotamerSubset	virtual
id_for_current_rotamer_	core::pack::rotamer_set::RotamerSubset	mutableprivate
initialize_pose_for_rotset_creation(pose::Pose &) const override	core::pack::rotamer_set::RotamerSubset	inlinevirtual
n_residue_groups_	core::pack::rotamer_set::RotamerSubset	mutableprivate
n_residue_types_	core::pack::rotamer_set::RotamerSubset	mutableprivate
n_rotamers_for_resgroup_	core::pack::rotamer_set::RotamerSubset	mutableprivate
n_rotamers_for_restype_	core::pack::rotamer_set::RotamerSubset	mutableprivate
new_residue_group()	core::pack::rotamer_set::RotamerSubset	private
new_residue_type()	core::pack::rotamer_set::RotamerSubset	private
nonconst_rotamer(Size rot_id) override	core::pack::rotamer_set::RotamerSubset	virtual
num_rotamers() const override	core::pack::rotamer_set::RotamerSubset	virtual
prepare_for_new_residue_type(core::chemical::ResidueType const &restype)	core::pack::rotamer_set::RotamerSubset	private
push_back_rotamer(conformation::ResidueOP)	core::pack::rotamer_set::RotamerSubset	private
resid() const override	core::pack::rotamer_set::RotamerSet	inlinevirtual
residue_group_for_rotamers_	core::pack::rotamer_set::RotamerSubset	mutableprivate
residue_group_rotamers_begin_	core::pack::rotamer_set::RotamerSubset	mutableprivate
residue_type_for_rotamers_	core::pack::rotamer_set::RotamerSubset	mutableprivate
residue_type_rotamers_begin_	core::pack::rotamer_set::RotamerSubset	mutableprivate
ResidueCOP typedef	core::pack::rotamer_set::RotamerSubset
ResidueOP typedef	core::pack::rotamer_set::RotamerSubset
rotamer(Size rot_id) const override	core::pack::rotamer_set::RotamerSubset	virtual
rotamer_data_cache(Size rot_id) const override	core::pack::rotamer_set::RotamerSubset	virtual
rotamer_offsets_require_update_	core::pack::rotamer_set::RotamerSubset	mutableprivate
rotamer_ref(Size rot_id) const override	core::pack::rotamer_set::RotamerSubset	virtual
rotamers_	core::pack::rotamer_set::RotamerSubset	mutableprivate
rotamers_waiting_for_sort_	core::pack::rotamer_set::RotamerSubset	mutableprivate
RotamerSet()	core::pack::rotamer_set::RotamerSet
RotamerSetBase()	core::conformation::RotamerSetBase
RotamerSubset(RotamerSet &rotset, utility::vector1< Size > const &rotamer_subset)	core::pack::rotamer_set::RotamerSubset
RotamerSubset(RotamerSubset const &)	core::pack::rotamer_set::RotamerSubset	private
RotamerTrieBaseOP typedef	core::pack::rotamer_set::RotamerSubset
set_resid(Size resid)	core::pack::rotamer_set::RotamerSet
show(std::ostream &out) const override	core::pack::rotamer_set::RotamerSubset	virtual
steal_rotamer(conformation::ResidueOP rotamer)	core::pack::rotamer_set::RotamerSubset	private
store_trie(Size method_enum_id, conformation::AbstractRotamerTrieOP trie) override	core::pack::rotamer_set::RotamerSubset	virtual
update_rotamer_offsets() const override	core::pack::rotamer_set::RotamerSubset	privatevirtual
~RotamerSet() override	core::pack::rotamer_set::RotamerSet
~RotamerSetBase() override	core::conformation::RotamerSetBase
~RotamerSubset() override	core::pack::rotamer_set::RotamerSubset