#include <EtableOptions.hh>

Inheritance diagram for core::scoring::etable::EtableOptions:

Public Member Functions
	EtableOptions ()

	EtableOptions (utility::options::OptionCollection const &options)

	~EtableOptions () override

	EtableOptions (EtableOptions const &src)

EtableOptions &	operator= (EtableOptions const &src)

void	show (std::ostream &out) const

void	parse_my_tag (utility::tag::TagCOP tag)

void	initialize_from_options ()

void	initialize_from_options (utility::options::OptionCollection const &options)

Static Public Member Functions
static void	append_schema_attributes (utility::tag::AttributeList &attributes)

static void	list_options_read (utility::options::OptionKeyList &option_list)

Public Attributes
std::string	etable_type

bool	analytic_etable_evaluation

Real	max_dis

int	bins_per_A2

Real	Wradius

Real	lj_switch_dis2sigma

bool	no_lk_polar_desolvation

bool	proline_N_is_lk_nonpolar

Real	lj_hbond_OH_donor_dis

Real	lj_hbond_hdis

bool	enlarge_h_lj_wdepth

bool	fa_hatr

Friends
bool	operator< (EtableOptions const &a, EtableOptions const &b)

bool	operator== (EtableOptions const &a, EtableOptions const &b)

std::ostream &	operator<< (std::ostream &out, const EtableOptions &options)

Constructor & Destructor Documentation

core::scoring::etable::EtableOptions::EtableOptions ( )

Delegating constructor that passes the global option collection to the other constructor.

core::scoring::etable::EtableOptions::EtableOptions ( utility::options::OptionCollection const & options )

References initialize_from_options().

core::scoring::etable::EtableOptions::~EtableOptions ( )

overridedefault

core::scoring::etable::EtableOptions::EtableOptions ( EtableOptions const & src )

Member Function Documentation

void core::scoring::etable::EtableOptions::append_schema_attributes ( utility::tag::AttributeList & attributes )

static

Referenced by protocols::parser::ScoreFunctionLoader::provide_xml_schema().

void core::scoring::etable::EtableOptions::initialize_from_options ( )

Referenced by EtableOptions().

void core::scoring::etable::EtableOptions::initialize_from_options ( utility::options::OptionCollection const & options )

References analytic_etable_evaluation, fa_hatr, lj_hbond_hdis, lj_hbond_OH_donor_dis, max_dis, no_lk_polar_desolvation, and core::scoring::etable::TR().

void core::scoring::etable::EtableOptions::list_options_read ( utility::options::OptionKeyList & option_list )

static

Referenced by core::scoring::methods::EnergyMethodOptions::list_options_read().

EtableOptions & core::scoring::etable::EtableOptions::operator= ( EtableOptions const & src )

References analytic_etable_evaluation, bins_per_A2, enlarge_h_lj_wdepth, etable_type, fa_hatr, lj_hbond_hdis, lj_hbond_OH_donor_dis, lj_switch_dis2sigma, max_dis, no_lk_polar_desolvation, proline_N_is_lk_nonpolar, and Wradius.

void core::scoring::etable::EtableOptions::parse_my_tag ( utility::tag::TagCOP tag )

References lj_hbond_hdis, lj_hbond_OH_donor_dis, and max_dis.

void core::scoring::etable::EtableOptions::show ( std::ostream & out ) const

References bins_per_A2, enlarge_h_lj_wdepth, fa_hatr, lj_hbond_hdis, lj_hbond_OH_donor_dis, lj_switch_dis2sigma, max_dis, no_lk_polar_desolvation, proline_N_is_lk_nonpolar, and Wradius.

Referenced by core::scoring::etable::operator<<().

Friends And Related Function Documentation

bool operator<	(	EtableOptions const &	a,
		EtableOptions const &	b
	)

friend

std::ostream& operator<<	(	std::ostream &	out,
		const EtableOptions &	options
	)

friend

bool operator==	(	EtableOptions const &	a,
		EtableOptions const &	b
	)

friend

Member Data Documentation

bool core::scoring::etable::EtableOptions::analytic_etable_evaluation

Referenced by initialize_from_options(), core::scoring::etable::operator<(), operator=(), and core::scoring::etable::operator==().

int core::scoring::etable::EtableOptions::bins_per_A2

Referenced by core::scoring::etable::operator<(), operator=(), core::scoring::etable::operator==(), and show().

bool core::scoring::etable::EtableOptions::enlarge_h_lj_wdepth

Referenced by core::scoring::etable::operator<(), operator=(), core::scoring::etable::operator==(), and show().

std::string core::scoring::etable::EtableOptions::etable_type

Referenced by core::scoring::ScoringManager::etable(), core::scoring::etable::operator<(), operator=(), and core::scoring::etable::operator==().

bool core::scoring::etable::EtableOptions::fa_hatr

Referenced by initialize_from_options(), core::scoring::etable::operator<(), operator=(), core::scoring::etable::operator==(), and show().

Real core::scoring::etable::EtableOptions::lj_hbond_hdis

Referenced by initialize_from_options(), core::scoring::etable::operator<(), operator=(), core::scoring::etable::operator==(), parse_my_tag(), and show().

Real core::scoring::etable::EtableOptions::lj_hbond_OH_donor_dis

Referenced by initialize_from_options(), core::scoring::etable::operator<(), operator=(), core::scoring::etable::operator==(), parse_my_tag(), and show().

Real core::scoring::etable::EtableOptions::lj_switch_dis2sigma

Referenced by core::scoring::ScoringManager::make_partially_soft_etable(), core::scoring::etable::operator<(), operator=(), core::scoring::etable::operator==(), and show().

Real core::scoring::etable::EtableOptions::max_dis

Referenced by core::scoring::etable::Etable::calculate_nblist_distance_thresholds(), core::pack::guidance_scoreterms::sap::SapConstraintHelper::init(), initialize_from_options(), core::scoring::etable::operator<(), operator=(), core::scoring::etable::operator==(), parse_my_tag(), and show().

bool core::scoring::etable::EtableOptions::no_lk_polar_desolvation

Referenced by core::energy_methods::create_ExactSHOEnergy_from_cmdline(), initialize_from_options(), core::scoring::etable::operator<(), operator=(), core::scoring::etable::operator==(), and show().

bool core::scoring::etable::EtableOptions::proline_N_is_lk_nonpolar

Referenced by core::energy_methods::create_ExactSHOEnergy_from_cmdline(), core::scoring::etable::operator<(), operator=(), core::scoring::etable::operator==(), and show().

Real core::scoring::etable::EtableOptions::Wradius

Referenced by core::scoring::etable::operator<(), operator=(), core::scoring::etable::operator==(), and show().

The documentation for this class was generated from the following files:

src/core/scoring/etable/EtableOptions.hh
src/core/scoring/etable/EtableOptions.cc

Public Member Functions

Static Public Member Functions

Public Attributes

Friends

Constructor & Destructor Documentation

Member Function Documentation

Friends And Related Function Documentation

Member Data Documentation