ExactOccludedHbondSolEnergy.cc File Reference

#include <core/energy_methods/ExactOccludedHbondSolEnergy.hh>
#include <core/energy_methods/ExactOccludedHbondSolEnergyCreator.hh>
#include <core/types.hh>
#include <core/id/AtomID.hh>
#include <core/pose/Pose.hh>
#include <core/chemical/ChemicalManager.hh>
#include <core/chemical/AtomType.hh>
#include <core/chemical/AtomTypeSet.hh>
#include <core/conformation/Atom.hh>
#include <core/scoring/EnergyGraph.hh>
#include <core/scoring/ScoringManager.hh>
#include <core/scoring/ScoreFunction.hh>
#include <core/scoring/etable/count_pair/CountPairFunction.hh>
#include <core/scoring/etable/count_pair/CountPairFactory.hh>
#include <core/scoring/etable/Etable.hh>
#include <core/scoring/etable/EtableEnergy.hh>
#include <core/scoring/Energies.hh>
#include <core/scoring/EnergyMap.hh>
#include <core/scoring/TenANeighborGraph.hh>
#include <basic/Tracer.hh>
#include <core/scoring/hbonds/HBondDatabase.hh>
#include <core/scoring/hbonds/HBEvalTuple.hh>
#include <core/scoring/hbonds/HBondOptions.hh>
#include <core/scoring/hbonds/HBondSet.hh>
#include <core/scoring/hbonds/hbonds.hh>
#include <core/scoring/hbonds/hbonds_geom.hh>
#include <core/scoring/hbonds/types.hh>
#include <core/scoring/hbonds/constants.hh>
#include <numeric/xyzVector.hh>
#include <numeric/xyzMatrix.hh>
#include <basic/options/keys/score.OptionKeys.gen.hh>
#include <utility/vector1.hh>
#include <cmath>
#include <iostream>
#include <iomanip>
#include <map>
#include <vector>
#include <platform/types.hh>
#include <core/chemical/ResConnID.hh>
#include <core/chemical/ResidueType.hh>
#include <core/conformation/Residue.hh>
#include <core/id/DOF_ID.hh>
#include <core/id/DOF_ID_Map.fwd.hh>
#include <core/kinematics/FoldTree.hh>
#include <core/kinematics/Jump.hh>
#include <numeric/xyz.functions.hh>
#include <ObjexxFCL/FArray3D.hh>
#include <basic/options/option.hh>
#include <utility/Bound.hh>
#include <utility/string_util.hh>
#include <utility/vector0_bool.hh>
#include <utility/file/FileName.hh>
#include <utility/keys/SmallKeyVector.hh>
#include <utility/options/BooleanOption.hh>
#include <utility/options/OptionCollection.hh>
#include <utility/thread/threadsafe_creation.hh>

Namespaces
	core
	A class for reading in the atom type properties.
	core::energy_methods

Functions
static basic::Tracer	TR ("core.energy_methods.ExactOccludedHbondSolEnergy")
ExactOccludedHbondSolEnergyOP	core::energy_methods::create_ExactSHOEnergy_from_cmdline (core::scoring::methods::EnergyMethodOptions const &options)
	creates an ExactOccludedHbondSolEnergy object according to command-line options More...

Variables
core::Real const	core::energy_methods::geosol_kT = { 0.593 }
core::Real const	core::energy_methods::LK_MATCHING_SLOPE = { 0.4775 }
core::Real const	core::energy_methods::LK_MATCHING_INTERCEPT = { 0 }

Function Documentation

static basic::Tracer TR ( "core.energy_methods.ExactOccludedHbondSolEnergy"  )

static

Author

jk

Andrea Bazzoli (bazzo.nosp@m.li@k.nosp@m.u.edu)