CCDLoopClosureMover.hh File Reference

Class definition and method declarations for CCDLoopClosureMover. More...

#include <protocols/loops/loop_closure/ccd/CCDLoopClosureMover.fwd.hh>
#include <protocols/moves/Mover.hh>
#include <protocols/loops/Loop.hh>
#include <protocols/loops/loop_closure/ccd/RamaCheck.fwd.hh>
#include <core/types.hh>
#include <core/id/TorsionID.fwd.hh>
#include <core/conformation/Residue.fwd.hh>
#include <core/kinematics/MoveMap.fwd.hh>
#include <string>

Classes
class	protocols::loops::loop_closure::ccd::CCDLoopClosureMover
	Close a loop (protein or otherwise) using bi-directional Cyclic Coordinate Descent. More...

Namespaces
	protocols
	The instance of Loops contained by AbrelaxApplication should be replaced by a LoopsOP.
	protocols::loops
	protocols::loops::loop_closure
	protocols::loops::loop_closure::ccd

Enumerations
enum	protocols::loops::loop_closure::ccd::ChainDirection { protocols::loops::loop_closure::ccd::forward = 1, protocols::loops::loop_closure::ccd::backward, protocols::loops::loop_closure::ccd::n_chain_directions = backward }
enum	protocols::loops::loop_closure::ccd::SecondaryStructureType { protocols::loops::loop_closure::ccd::helix = 1, protocols::loops::loop_closure::ccd::strand, protocols::loops::loop_closure::ccd::coil, protocols::loops::loop_closure::ccd::n_secondary_structure_types = coil }

Functions
std::ostream &	protocols::loops::loop_closure::ccd::operator<< (std::ostream &os, CCDLoopClosureMover const &mover)

Detailed Description

Class definition and method declarations for CCDLoopClosureMover.

Author

Phil Bradley

Oliver Lange

Brian Weitzner

Labonte JWLab.nosp@m.onte.nosp@m.@jhu..nosp@m.edu

Currently contains a classic ab initio implementation of CCD closure, according to Oliver....

Note

This file is the result of a refactor of code written by Phil and later wrapped in a Mover by Oliver.