util.cc File Reference

#include <core/chemical/AtomType.hh>
#include <core/scoring/magnesium/util.hh>
#include <core/scoring/hbonds/HBondOptions.hh>
#include <core/scoring/hbonds/hbonds_geom.hh>
#include <core/conformation/Residue.hh>
#include <core/chemical/rna/RNA_FittedTorsionInfo.hh>
#include <basic/Tracer.hh>

Namespaces
	core
	A class for reading in the atom type properties.
	core::scoring
	core::scoring::magnesium

Functions
static basic::Tracer	TR ("core.scoring.magnesium.util")
Real	core::scoring::magnesium::get_cos_theta (core::conformation::Residue const &rsd1, Size const i, Vector const &j_xyz, Size const i_base)
Real	core::scoring::magnesium::get_cos_theta (core::conformation::Residue const &rsd1, Size const i, Vector const &j_xyz, Size &i_base, Vector &xyz_base)
Real	core::scoring::magnesium::get_gaussian_potential_score (GaussianParameter const &mg_potential_gaussian_parameter, Vector const &pos1, Vector const &pos2)
Real	core::scoring::magnesium::get_gaussian_score (GaussianParameter const &mg_potential_gaussian_parameter, Real const &d)
Real	core::scoring::magnesium::get_gaussian_deriv (GaussianParameter const &mg_potential_gaussian_parameter, Real const &d)
void	core::scoring::magnesium::get_closest_orbital_axis (core::conformation::Residue const &mg_rsd, Vector const &j_xyz, Size &which_orbital_atom, Real &cos_angle)
Real	core::scoring::magnesium::get_cos_angle_to_closest_orbital_axis (core::conformation::Residue const &mg_rsd, Vector const &j_xyz)
Size	core::scoring::magnesium::get_closest_orbital_axis (core::conformation::Residue const &mg_rsd, Vector const &j_xyz)

Detailed Description

Author

Rhiju Das, rhiju.nosp@m.@sta.nosp@m.nford.nosp@m..edu

Function Documentation

static basic::Tracer TR ( "core.scoring.magnesium.util"  )

static