| append_attributes(utility::tag::AttributeList &attlist) | protocols::rotamer_recovery::RRProtocolReferenceStructure | static |
| get_name() const override | protocols::rotamer_recovery::RRProtocolReferenceStructure | virtual |
| get_parameters() const override | protocols::rotamer_recovery::RRProtocolReferenceStructure | virtual |
| measure_rotamer_recovery(RRComparerOP comparer, RRReporterOP reporter, core::pose::Pose const &pose1, core::pose::Pose const &pose2, core::conformation::Residue const &res1, core::conformation::Residue const &res2) | protocols::rotamer_recovery::RRProtocol | protected |
| parse_attributes_from_tag(basic::datacache::DataMap const &dm, utility::tag::TagCOP tag) override | protocols::rotamer_recovery::RRProtocolReferenceStructure | virtual |
| reference_pose_ | protocols::rotamer_recovery::RRProtocolReferenceStructure | private |
| reference_structure(core::pose::PoseCOP reference_pose) | protocols::rotamer_recovery::RRProtocolReferenceStructure | |
| RRProtocolReferenceStructure() | protocols::rotamer_recovery::RRProtocolReferenceStructure | |
| RRProtocolReferenceStructure(core::pose::PoseCOP reference_pose) | protocols::rotamer_recovery::RRProtocolReferenceStructure | |
| RRProtocolReferenceStructure(RRProtocolReferenceStructure const &src) | protocols::rotamer_recovery::RRProtocolReferenceStructure | |
| run(RRComparerOP comparer, RRReporterOP reporter, core::pose::Pose const &pose, core::scoring::ScoreFunction const &, core::pack::task::PackerTask const &packer_task) override | protocols::rotamer_recovery::RRProtocolReferenceStructure | virtual |
| ~RRProtocol() override | protocols::rotamer_recovery::RRProtocol | |
| ~RRProtocolReferenceStructure() override | protocols::rotamer_recovery::RRProtocolReferenceStructure | |