core::scoring::NeighborList Member List

This is the complete list of members for core::scoring::NeighborList, including all inherited members.

atom_needs_update_from_wide_	core::scoring::NeighborList	mutableprivate
atom_neighbors(int const pos, int const atomno) const	core::scoring::NeighborList	inline
atom_neighbors(id::AtomID const &id) const	core::scoring::NeighborList	inline
atom_pair_cutoff(bool atom1_is_hydrogen, bool atom2_is_hydrogen) const	core::scoring::NeighborList	inlineprivate
atoms_to_update_	core::scoring::NeighborList	mutableprivate
auto_update_	core::scoring::NeighborList	private
check_domain_map(kinematics::DomainMap const &domain_map_in) const	core::scoring::NeighborList
clear()	core::scoring::NeighborList	inline
clone() const	core::scoring::NeighborList	inline
declare_atom_neighbor_1sided(id::AtomID at1, id::AtomID at2, Size path_dist, Real weight, Real weight_func=1.0) const	core::scoring::NeighborList	protected
declare_atoms_neighbors(id::AtomID at1, id::AtomID at2, Size path_dist, Real weight, Real weight_func=1.0) const	core::scoring::NeighborList	protected
disable_auto_update()	core::scoring::NeighborList
domain_map() const	core::scoring::NeighborList	inline
domain_map_	core::scoring::NeighborList	private
HH_cutoff_	core::scoring::NeighborList	private
HH_cutoff_wide_	core::scoring::NeighborList	private
intrares_upper_atom_neighbors(int const pos, int const atomno) const	core::scoring::NeighborList	inline
intrares_upper_atom_neighbors(id::AtomID const &id) const	core::scoring::NeighborList	inline
intrares_upper_nblist_	core::scoring::NeighborList	mutableprivate
move_tolerance_sqr_	core::scoring::NeighborList	private
n_full_updates_	core::scoring::NeighborList	mutableprivate
n_prepare_for_scorings_	core::scoring::NeighborList	mutableprivate
n_update_from_wide_	core::scoring::NeighborList	mutableprivate
nblist_	core::scoring::NeighborList	mutableprivate
NeighborList(kinematics::DomainMap const &domain_map, Real const XX_cutoff, Real const XH_cutoff, Real const HH_cutoff)	core::scoring::NeighborList
prepare_for_scoring(pose::Pose const &pose, ScoreFunction const &sfxn, T_Etable const &etable_method) const	core::scoring::NeighborList
reference_coords_	core::scoring::NeighborList	mutableprivate
set_auto_update(Distance move_tolerance)	core::scoring::NeighborList
setup(pose::Pose const &pose, ScoreFunction const &sfxn, T_Etable const &etable_method) const	core::scoring::NeighborList
sqrt_HH_cutoff_	core::scoring::NeighborList	private
sqrt_XH_cutoff_	core::scoring::NeighborList	private
sqrt_XX_cutoff_	core::scoring::NeighborList	private
update_from_wide_nblist(pose::Pose const &pose) const	core::scoring::NeighborList	private
upper_atom_neighbors(int const pos, int const atomno) const	core::scoring::NeighborList	inline
upper_atom_neighbors(id::AtomID const &id) const	core::scoring::NeighborList	inline
upper_nblist_	core::scoring::NeighborList	mutableprivate
wide_move_tolerance_sqr_	core::scoring::NeighborList	private
wide_nblist_	core::scoring::NeighborList	mutableprivate
wide_nblist_extension_	core::scoring::NeighborList	private
wide_reference_coords_	core::scoring::NeighborList	mutableprivate
XH_cutoff_	core::scoring::NeighborList	private
XH_cutoff_wide_	core::scoring::NeighborList	private
XX_cutoff_	core::scoring::NeighborList	private
XX_cutoff_wide_	core::scoring::NeighborList	private
~NeighborList() override	core::scoring::NeighborList