util.hh File Reference

Utility function declarations for poses with noncanonical backbone. More...

#include <core/pose/Pose.fwd.hh>
#include <core/id/AtomID.fwd.hh>
#include <core/types.hh>

Namespaces
	core
	A class for reading in the atom type properties.
	core::pose
	core::pose::ncbb

Functions
utility::vector1< core::Size >	core::pose::ncbb::initialize_ncbbs (Pose &pose)
utility::vector1< core::Size >	core::pose::ncbb::initialize_oops (Pose &pose)
utility::vector1< core::Size >	core::pose::ncbb::initialize_hbs (Pose &pose)
void	core::pose::ncbb::add_triazole_constraint (core::pose::Pose &pose, core::Size triazole_seq_position)
	Add constraints to keep triazole closed. More...
void	core::pose::ncbb::add_oop_constraint (core::pose::Pose &pose, core::Size oop_seq_position)
	Add constraints to keep oligooxopiperazine (oop) ring closed, default values (distance = 1.5, std = 0.05) More...
void	core::pose::ncbb::add_oop_constraint (core::pose::Pose &pose, core::Size oop_seq_position, core::Real distance, core::Real std)
	Add constraints to keep oligooxopiperazine (oop) ring closed. More...
void	core::pose::ncbb::add_hbs_constraint (core::pose::Pose &pose, core::Size oop_seq_position)
	Add constraints to keep hydrogen bond surrogate (hbs) macrocycle closed, default values (distance = 1.52, std = 0.05) More...
void	core::pose::ncbb::add_hbs_constraint (core::pose::Pose &pose, core::Size hbs_seq_position, core::Real distance, core::Real std)
	Add constraints to keep hydrogen bond surrogate (hbs) ring closed. More...
void	core::pose::ncbb::add_a3b_hbs_constraint (core::pose::Pose &pose, core::Size oop_seq_position)
	Add constraints to keep a3b hydrogen bond surrogate (hbs) macrocycle closed, default values (distance = 1.52, std = 0.05) More...
void	core::pose::ncbb::add_a3b_hbs_constraint (core::pose::Pose &pose, core::Size hbs_seq_position, core::Real distance, core::Real std)
	Add constraints to keep a3b hydrogen bond surrogate (hbs) ring closed. More...
void	core::pose::ncbb::constrain_ring_atoms (core::pose::Pose &pose, utility::vector1< core::id::AtomID > ids)

Detailed Description

Utility function declarations for poses with noncanonical backbone.

Author

kdrew

Andy Watkins