MRSJobQueen.cc File Reference

Queen for JD3 multistep protocol. More...

#include <protocols/multistage_rosetta_scripts/MRSJobQueen.hh>
#include <protocols/multistage_rosetta_scripts/MRSJob.hh>
#include <protocols/multistage_rosetta_scripts/MRSJobSummary.hh>
#include <protocols/multistage_rosetta_scripts/cluster/KMedoidsOnTheFly.hh>
#include <protocols/multistage_rosetta_scripts/cluster/ClusterMetricFactory.hh>
#include <protocols/multistage_rosetta_scripts/cluster/util.hh>
#include <numeric>
#include <algorithm>
#include <basic/options/option.hh>
#include <basic/Tracer.hh>
#include <basic/options/keys/parser.OptionKeys.gen.hh>
#include <basic/options/keys/in.OptionKeys.gen.hh>
#include <core/select/residue_selector/ResidueSelector.hh>
#include <core/pose/Pose.hh>
#include <protocols/jd3/InnerLarvalJob.hh>
#include <protocols/jd3/Job.hh>
#include <protocols/jd3/JobDigraph.hh>
#include <protocols/jd3/JobOutputIndex.hh>
#include <protocols/jd3/JobResult.hh>
#include <protocols/jd3/JobSummary.hh>
#include <protocols/jd3/JobTracker.hh>
#include <protocols/jd3/CompletedJobOutput.fwd.hh>
#include <protocols/jd3/standard/PreliminaryLarvalJob.hh>
#include <protocols/jd3/standard/StandardInnerLarvalJob.hh>
#include <protocols/jd3/dag_node_managers/NodeManager.hh>
#include <protocols/jd3/dag_node_managers/EvenlyPartitionedNodeManager.hh>
#include <protocols/jd3/dag_node_managers/SimpleNodeManager.hh>
#include <protocols/jd3/pose_inputters/PoseInputSource.hh>
#include <protocols/jd3/pose_inputters/PoseInputter.hh>
#include <protocols/jd3/pose_outputters/PoseOutputSpecification.hh>
#include <protocols/jd3/job_summaries/StandardPoseJobSummary.hh>
#include <protocols/jd3/job_results/PoseJobResult.hh>
#include <protocols/filters/BasicFilters.hh>
#include <protocols/filters/filter_schemas.hh>
#include <protocols/filters/FilterFactory.hh>
#include <protocols/filters/FilterCreator.hh>
#include <protocols/jobdist/standard_mains.hh>
#include <protocols/jobdist/Jobs.hh>
#include <protocols/rosetta_scripts/RosettaScriptsParser.hh>
#include <protocols/parser/DataLoader.hh>
#include <protocols/parser/DataLoaderFactory.hh>
#include <protocols/parser/ResidueSelectorLoader.hh>
#include <protocols/moves/NullMover.hh>
#include <protocols/moves/mover_schemas.hh>
#include <protocols/moves/MoverFactory.hh>
#include <protocols/moves/MoverCreator.hh>
#include <utility/tag/Tag.hh>
#include <utility/tag/XMLSchemaGeneration.hh>
#include <utility/tag/XMLSchemaValidation.hh>
#include <utility/options/OptionCollection.fwd.hh>
#include <utility/pointer/memory.hh>

Namespaces
	protocols
	The instance of Loops contained by AbrelaxApplication should be replaced by a LoopsOP.
	protocols::multistage_rosetta_scripts

Functions
static basic::Tracer	TR ("protocols.multistage_rosetta_scripts.MRSJobQueen")

Detailed Description

Queen for JD3 multistep protocol.

Author

Jack Maguire, jackm.nosp@m.agui.nosp@m.re144.nosp@m.4@gm.nosp@m.ail.c.nosp@m.om

Function Documentation

static basic::Tracer TR ( "protocols.multistage_rosetta_scripts.MRSJobQueen"  )

static