HighResEnsemble.cc File Reference

#include <protocols/ligand_docking/HighResEnsemble.hh>
#include <protocols/ligand_docking/HighResEnsembleCreator.hh>
#include <protocols/ligand_docking/InterfaceBuilder.hh>
#include <protocols/ligand_docking/ligand_options/Interface.hh>
#include <protocols/ligand_docking/MinimizeLigand.hh>
#include <protocols/ligand_docking/MoveMapBuilder.hh>
#include <protocols/ligand_docking/TetherLigand.hh>
#include <core/pose/util.hh>
#include <core/pose/chains_util.hh>
#include <protocols/ligand_docking/UnconstrainedTorsionsMover.hh>
#include <protocols/moves/Mover.hh>
#include <protocols/minimization_packing/MinMover.hh>
#include <protocols/moves/MonteCarlo.hh>
#include <protocols/minimization_packing/PackRotamersMover.hh>
#include <protocols/minimization_packing/RotamerTrialsMover.hh>
#include <basic/options/option.hh>
#include <basic/options/keys/docking.OptionKeys.gen.hh>
#include <core/chemical/ResidueTypeSet.hh>
#include <core/optimization/MinimizerOptions.hh>
#include <core/kinematics/MoveMap.hh>
#include <core/pack/task/ResfileReader.hh>
#include <core/pack/task/TaskFactory.hh>
#include <core/pack/rotamer_set/UnboundRotamersOperation.hh>
#include <core/scoring/ScoreFunction.hh>
#include <protocols/ligand_docking/ligand_scores.hh>
#include <core/pose/Pose.hh>
#include <core/conformation/Residue.hh>
#include <core/scoring/Energies.hh>
#include <core/chemical/ResidueType.hh>
#include <basic/options/keys/packing.OptionKeys.gen.hh>
#include <basic/options/keys/out.OptionKeys.gen.hh>
#include <protocols/jd2/util.hh>
#include <algorithm>
#include <sstream>
#include <utility/string_util.hh>
#include <core/types.hh>
#include <basic/Tracer.hh>
#include <utility/json_spirit/json_spirit_reader.h>
#include <utility/io/izstream.hh>
#include <core/pack/task/PackerTask.hh>
#include <utility/tag/Tag.hh>
#include <string>
#include <set>
#include <protocols/ligand_docking/LigandArea.hh>
#include <utility/vector0.hh>
#include <utility/vector1.hh>
#include <utility/tag/XMLSchemaGeneration.hh>
#include <protocols/moves/mover_schemas.hh>
#include <basic/citation_manager/UnpublishedModuleInfo.hh>
#include <basic/citation_manager/CitationCollection.hh>
#include <basic/citation_manager/CitationManager.hh>

Namespaces
	protocols
	The instance of Loops contained by AbrelaxApplication should be replaced by a LoopsOP.
	protocols::ligand_docking

Functions
static basic::Tracer	protocols::ligand_docking::high_res_docker_tracer ("protocols.ligand_docking.ligand_options.Protocol", basic::t_debug)
void	protocols::ligand_docking::vector_to_rank (utility::vector1< std::pair< core::Size, core::Real > > &vector)
core::Real	protocols::ligand_docking::spearman (utility::vector1< std::pair< core::Size, core::Real > > vector_exp, utility::vector1< std::pair< core::Size, core::Real > > vector_rosetta)
bool	protocols::ligand_docking::sort_by_second (std::pair< core::Size, core::Real > left_lig, std::pair< core::Size, core::Real > right_lig)