protocols::analysis::simple_metrics::SequenceRecoveryMetric Member List

This is the complete list of members for protocols::analysis::simple_metrics::SequenceRecoveryMetric, including all inherited members.

apply(std::string const &out_label, pose::Pose &pose, bool override_existing_data=false) const override	core::simple_metrics::RealMetric	virtual
core::simple_metrics::SimpleMetric::apply(pose::Pose &pose, std::string const &prefix="", std::string const &suffix="", bool override_existing_data=false) const	core::simple_metrics::SimpleMetric
cached_calculate(pose::Pose const &pose, bool use_cache, std::string prefix="", std::string suffix="", bool fail_on_missing_cache=true) const	core::simple_metrics::RealMetric
calculate(core::pose::Pose const &pose) const override	protocols::analysis::simple_metrics::SequenceRecoveryMetric	virtual
clone() const override	protocols::analysis::simple_metrics::SequenceRecoveryMetric	virtual
complex_type_generator_for_simple_metric(utility::tag::XMLSchemaDefinition &)	core::simple_metrics::SimpleMetric	static
get_custom_type() const	core::simple_metrics::SimpleMetric
get_final_sm_type() const	core::simple_metrics::SimpleMetric
get_metric_names() const override	core::simple_metrics::RealMetric	virtual
load_pssm(std::string const &pssm_filename)	protocols::analysis::simple_metrics::SequenceRecoveryMetric
metric() const override	protocols::analysis::simple_metrics::SequenceRecoveryMetric	virtual
name() const override	protocols::analysis::simple_metrics::SequenceRecoveryMetric	virtual
name_static()	protocols::analysis::simple_metrics::SequenceRecoveryMetric	static
operator=(RealMetric const &)	core::simple_metrics::RealMetric
core::simple_metrics::SimpleMetric::operator=(SimpleMetric const &)	core::simple_metrics::SimpleMetric
parse_base_tag(utility::tag::TagCOP tag)	core::simple_metrics::SimpleMetric	virtual
parse_my_tag(utility::tag::TagCOP tag, basic::datacache::DataMap &data) override	protocols::analysis::simple_metrics::SequenceRecoveryMetric	virtual
provide_citation_info(basic::citation_manager::CitationCollectionList &) const	core::simple_metrics::SimpleMetric	virtual
provide_xml_schema(utility::tag::XMLSchemaDefinition &xsd)	protocols::analysis::simple_metrics::SequenceRecoveryMetric	static
RealMetric()	core::simple_metrics::RealMetric
RealMetric(RealMetric const &other)	core::simple_metrics::RealMetric
ref_pose_	protocols::analysis::simple_metrics::SequenceRecoveryMetric	private
ref_profile_	protocols::analysis::simple_metrics::SequenceRecoveryMetric	private
res_select_	protocols::analysis::simple_metrics::SequenceRecoveryMetric	private
res_select_ref_	protocols::analysis::simple_metrics::SequenceRecoveryMetric	private
SequenceRecoveryMetric()	protocols::analysis::simple_metrics::SequenceRecoveryMetric
SequenceRecoveryMetric(SequenceRecoveryMetric const &src)	protocols::analysis::simple_metrics::SequenceRecoveryMetric
set_comparison_pose(core::pose::PoseCOP pose)	protocols::analysis::simple_metrics::SequenceRecoveryMetric
set_custom_type(std::string const &custom_type)	core::simple_metrics::SimpleMetric
set_residue_selector(core::select::residue_selector::ResidueSelectorCOP residue_selector)	protocols::analysis::simple_metrics::SequenceRecoveryMetric
set_residue_selector_ref(core::select::residue_selector::ResidueSelectorCOP residue_selector)	protocols::analysis::simple_metrics::SequenceRecoveryMetric
set_use_ave_pssm(bool setting)	protocols::analysis::simple_metrics::SequenceRecoveryMetric	inline
simple_metric_type() const	core::simple_metrics::SimpleMetric	inline
SimpleMetric(std::string const &simple_metric_type)	core::simple_metrics::SimpleMetric
SimpleMetric(SimpleMetric const &other)	core::simple_metrics::SimpleMetric
use_ave_pssm_	protocols::analysis::simple_metrics::SequenceRecoveryMetric	private
~RealMetric() override	core::simple_metrics::RealMetric
~SequenceRecoveryMetric() override	protocols::analysis::simple_metrics::SequenceRecoveryMetric
~SimpleMetric() override	core::simple_metrics::SimpleMetric