StandardJobQueen.cc File Reference

StandardJobQueen class's method definitions. More...

#include <protocols/jd3/standard/StandardJobQueen.hh>
#include <protocols/jd3/standard/StandardInnerLarvalJob.hh>
#include <protocols/jd3/standard/PreliminaryLarvalJob.hh>
#include <protocols/jd3/standard/PreliminaryLarvalJobTracker.hh>
#include <protocols/jd3/LarvalJob.hh>
#include <protocols/jd3/InnerLarvalJob.hh>
#include <protocols/jd3/JobDigraph.hh>
#include <protocols/jd3/JobOutputIndex.hh>
#include <protocols/jd3/JobTracker.hh>
#include <protocols/jd3/jobs/MoverJob.hh>
#include <protocols/jd3/output/MultipleOutputSpecification.hh>
#include <protocols/jd3/output/MultipleOutputter.hh>
#include <protocols/jd3/pose_inputters/PoseInputSource.hh>
#include <protocols/jd3/pose_inputters/PoseInputter.hh>
#include <protocols/jd3/pose_inputters/PoseInputterCreator.hh>
#include <protocols/jd3/pose_inputters/PoseInputterFactory.hh>
#include <protocols/jd3/pose_outputters/PDBPoseOutputter.hh>
#include <protocols/jd3/pose_outputters/PoseOutputSpecification.hh>
#include <protocols/jd3/pose_outputters/PoseOutputter.hh>
#include <protocols/jd3/pose_outputters/PoseOutputterCreator.hh>
#include <protocols/jd3/pose_outputters/PoseOutputterFactory.hh>
#include <protocols/jd3/pose_outputters/SecondaryPoseOutputter.hh>
#include <protocols/jd3/deallocation/DeallocationMessage.hh>
#include <protocols/jd3/deallocation/InputPoseDeallocationMessage.hh>
#include <protocols/jd3/util.hh>
#include <protocols/rosetta_scripts/RosettaScriptsParser.hh>
#include <core/pose/Pose.hh>
#include <core/import_pose/import_pose_options.hh>
#include <utility/file/FileName.hh>
#include <utility/file/PathName.hh>
#include <utility/keys/VariantKey.hh>
#include <utility/options/OptionCollection.hh>
#include <utility/options/keys/OptionKeyList.hh>
#include <utility/VirtualBase.hh>
#include <utility/pointer/owning_ptr.hh>
#include <utility/tag/Tag.hh>
#include <utility/tag/XMLSchemaGeneration.hh>
#include <utility/tag/XMLSchemaValidation.hh>
#include <utility/tag/xml_schema_group_initialization.hh>
#include <utility/vector1.hh>
#include <basic/options/option.hh>
#include <basic/options/util.hh>
#include <basic/options/keys/out.OptionKeys.gen.hh>
#include <basic/options/keys/in.OptionKeys.gen.hh>
#include <basic/options/keys/jd3.OptionKeys.gen.hh>
#include <basic/options/option.cc.gen.hh>
#include <basic/datacache/ConstDataMap.hh>
#include <basic/Tracer.hh>

Namespaces
	protocols
	The instance of Loops contained by AbrelaxApplication should be replaced by a LoopsOP.
	protocols::jd3
	protocols::jd3::standard

Functions
static basic::Tracer	TR ("protocols.jd3.standard.StandardJobQueen")
std::string	protocols::jd3::standard::perform_variable_substitution (std::string const &job_def_string)

Detailed Description

StandardJobQueen class's method definitions.

Author

Andrew Leaver-Fay (aleav.nosp@m.erfa.nosp@m.y@gma.nosp@m.il.c.nosp@m.om)

Jared Adolf-Bryfogle (jadol.nosp@m.fbr@.nosp@m.gmail.nosp@m..com) Simplification/Refactor

Function Documentation

static basic::Tracer TR ( "protocols.jd3.standard.StandardJobQueen"  )

static