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core::sequence::NWAligner Member List

This is the complete list of members for core::sequence::NWAligner, including all inherited members.

align(SequenceOP seq_y, SequenceOP seq_x, ScoringSchemeOP ss) overridecore::sequence::NWAlignervirtual
Aligner()core::sequence::Alignerinline
init_matrix(Size y_len, Size x_len, ScoringSchemeOP ss, DP_Matrix &scores)core::sequence::NWAlignerstatic
NWAligner()core::sequence::NWAlignerinline
traceback(SequenceOP seq_x, SequenceOP seq_y, DP_Matrix matrix, CellOP start)core::sequence::Aligner
validate_input(SequenceOP seq_y, SequenceOP seq_x, ScoringSchemeOP ss)core::sequence::Aligner
~Aligner() override=defaultcore::sequence::Aligner
~NWAligner() override=defaultcore::sequence::NWAligner
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