core::pack::interaction_graph::SymmMinimalistNode Member List

This is the complete list of members for core::pack::interaction_graph::SymmMinimalistNode, including all inherited members.

acknowledge_last_substititon_not_committed()	core::pack::interaction_graph::SymmMinimalistNode
acknowledge_neighbors_partial_state_substitution(int edge_to_altered_neighbor, int other_node_new_state)	core::pack::interaction_graph::SymmMinimalistNode
acknowledge_neighbors_state_substitution(int edge_to_altered_neighbor, core::PackerEnergy new_edge_energy, int other_node_new_state)	core::pack::interaction_graph::SymmMinimalistNode	inline
add_edge(EdgeBase *edge_ptr)	core::pack::interaction_graph::NodeBase
add_to_one_body_energies(ObjexxFCL::FArray1< core::PackerEnergy > &energy1b) override	core::pack::interaction_graph::SymmOnTheFlyNode	virtual
add_to_one_body_energy(int state, core::PackerEnergy energy) override	core::pack::interaction_graph::SymmOnTheFlyNode	virtual
already_prepped_for_simA_	core::pack::interaction_graph::SymmMinimalistNode	private
alternate_state_	core::pack::interaction_graph::SymmMinimalistNode	private
alternate_state_is_being_considered_	core::pack::interaction_graph::SymmMinimalistNode	private
alternate_state_one_body_energy_	core::pack::interaction_graph::SymmMinimalistNode	private
alternate_state_total_energy_	core::pack::interaction_graph::SymmMinimalistNode	private
alternate_state_two_body_energies_	core::pack::interaction_graph::SymmMinimalistNode	private
assign_state(int new_state)	core::pack::interaction_graph::SymmMinimalistNode
assign_zero_state() override	core::pack::interaction_graph::SymmMinimalistNode	virtual
bb_bounding_sphere(int subunit) const	core::pack::interaction_graph::SymmOnTheFlyNode
BoundingSphere typedef	core::pack::interaction_graph::SymmOnTheFlyNode
commit_considered_substitution()	core::pack::interaction_graph::SymmMinimalistNode
complete_state_assignment()	core::pack::interaction_graph::SymmMinimalistNode
compute_pair_energy_for_alternate_state(int edge_making_energy_request)	core::pack::interaction_graph::SymmMinimalistNode
compute_pair_energy_for_current_state(int edge_making_energy_request)	core::pack::interaction_graph::SymmMinimalistNode
compute_rotamer_pair_energy(int edge_making_energy_request, int state_this, int state_other) const	core::pack::interaction_graph::SymmOnTheFlyNode
count_dynamic_memory() const override	core::pack::interaction_graph::SymmMinimalistNode	virtual
count_static_memory() const override	core::pack::interaction_graph::SymmMinimalistNode	virtual
curr_state_one_body_energy_	core::pack::interaction_graph::SymmMinimalistNode	private
curr_state_total_energy_	core::pack::interaction_graph::SymmMinimalistNode	private
curr_state_two_body_energies_	core::pack::interaction_graph::SymmMinimalistNode	private
current_state_	core::pack::interaction_graph::SymmMinimalistNode	private
depth_first_connected_component_counting()	core::pack::interaction_graph::NodeBase
distinguish_backbone_and_sidechain() const	core::pack::interaction_graph::SymmOnTheFlyNode	inline
distinguish_backbone_and_sidechain(bool setting)	core::pack::interaction_graph::SymmOnTheFlyNode
drop_all_edges()	core::pack::interaction_graph::NodeBase
drop_edge(std::list< EdgeBase * >::iterator edge_iterator)	core::pack::interaction_graph::NodeBase
edge_list_begin()	core::pack::interaction_graph::NodeBase
edge_list_end()	core::pack::interaction_graph::NodeBase
find_edge(int other_node_index) const	core::pack::interaction_graph::NodeBase
FixedBBNode(InteractionGraphBase *owner, int node_id, int num_states)	core::pack::interaction_graph::FixedBBNode	inline
get_adjacent_node(int index) const	core::pack::interaction_graph::NodeBase	inline
get_adjacent_node(int index)	core::pack::interaction_graph::NodeBase	inline
get_adjacent_otf_node(int index)	core::pack::interaction_graph::SymmOnTheFlyNode	inline
get_adjacent_otf_node(int index) const	core::pack::interaction_graph::SymmOnTheFlyNode	inline
get_adjacent_symmin_node(int index) const	core::pack::interaction_graph::SymmMinimalistNode	inline
get_adjacent_symmin_node(int index)	core::pack::interaction_graph::SymmMinimalistNode	inline
get_asu_rotamer(int state) const	core::pack::interaction_graph::SymmOnTheFlyNode
get_current_state() const	core::pack::interaction_graph::SymmMinimalistNode	inline
get_edge_vector_up_to_date() const	core::pack::interaction_graph::NodeBase	inlineprotected
get_incident_edge(int index) const	core::pack::interaction_graph::NodeBase	inline
get_incident_edge(int index)	core::pack::interaction_graph::NodeBase	inline
get_incident_otf_edge(int edge)	core::pack::interaction_graph::SymmOnTheFlyNode	inline
get_incident_otf_edge(int edge) const	core::pack::interaction_graph::SymmOnTheFlyNode	inline
get_incident_symmin_edge(int index) const	core::pack::interaction_graph::SymmMinimalistNode	inline
get_incident_symmin_edge(int index)	core::pack::interaction_graph::SymmMinimalistNode	inline
get_index_of_adjacent_node(int index) const	core::pack::interaction_graph::NodeBase	inline
get_node_index() const	core::pack::interaction_graph::NodeBase	inline
get_num_edges_to_larger_indexed_nodes() const	core::pack::interaction_graph::NodeBase	inline
get_num_edges_to_smaller_indexed_nodes() const	core::pack::interaction_graph::NodeBase	inline
get_num_incident_edges() const	core::pack::interaction_graph::NodeBase	inline
get_num_res_types() const	core::pack::interaction_graph::SymmOnTheFlyNode	inline
get_num_restype_groups() const	core::pack::interaction_graph::SymmOnTheFlyNode	inline
get_num_states() const	core::pack::interaction_graph::NodeBase
get_num_states_for_restype_group()	core::pack::interaction_graph::SymmOnTheFlyNode	inline
get_num_states_for_restype_group() const	core::pack::interaction_graph::SymmOnTheFlyNode	inline
get_num_states_for_restype_group(int restype_group)	core::pack::interaction_graph::SymmOnTheFlyNode	inline
get_on_the_fly_owner()	core::pack::interaction_graph::SymmOnTheFlyNode	inline
get_on_the_fly_owner() const	core::pack::interaction_graph::SymmOnTheFlyNode	inline
get_one_body_energy(int state) const	core::pack::interaction_graph::SymmOnTheFlyNode	inline
get_one_body_energy_current_state() const	core::pack::interaction_graph::SymmMinimalistNode	inline
get_owner() const	core::pack::interaction_graph::NodeBase	inlineprotected
get_owner()	core::pack::interaction_graph::NodeBase	inlineprotected
get_rotamer(int state, int subunit) const	core::pack::interaction_graph::SymmOnTheFlyNode
get_state_offset_for_restype_group(int restype_group) const	core::pack::interaction_graph::SymmOnTheFlyNode	inline
get_symmin_ig_owner() const	core::pack::interaction_graph::SymmMinimalistNode	inline
get_symmin_ig_owner()	core::pack::interaction_graph::SymmMinimalistNode	inline
get_totalE() const	core::pack::interaction_graph::SymmMinimalistNode	inlinevirtual
HTReal typedef	core::pack::interaction_graph::SymmOnTheFlyNode
neighbors_curr_state_	core::pack::interaction_graph::SymmMinimalistNode	private
NodeBase(InteractionGraphBase *, int node_id, int num_states)	core::pack::interaction_graph::NodeBase
partial_assign_state(int new_state)	core::pack::interaction_graph::SymmMinimalistNode
prepare_for_simulated_annealing() override	core::pack::interaction_graph::SymmMinimalistNode	virtual
print() const override	core::pack::interaction_graph::SymmMinimalistNode	virtual
print_internal_energies() const	core::pack::interaction_graph::SymmMinimalistNode
project_deltaE_for_substitution(int alternate_state, core::PackerEnergy &prev_node_energy)	core::pack::interaction_graph::SymmMinimalistNode
sc_bounding_sphere(int state, int subunit) const	core::pack::interaction_graph::SymmOnTheFlyNode
set_one_body_energy(int state, core::PackerEnergy energy)	core::pack::interaction_graph::SymmOnTheFlyNode	virtual
set_rotamers(rotamer_set::RotamerSetCOP rotamers)	core::pack::interaction_graph::SymmOnTheFlyNode
state_unassigned() const override	core::pack::interaction_graph::SymmMinimalistNode	inlinevirtual
SymmMinimalistNode(InteractionGraphBase *owner, int node_id, int num_states)	core::pack::interaction_graph::SymmMinimalistNode
SymmOnTheFlyNode(InteractionGraphBase *owner, int node_id, int num_states)	core::pack::interaction_graph::SymmOnTheFlyNode
update_edge_vector()	core::pack::interaction_graph::NodeBase	protected
update_internal_energy_sums()	core::pack::interaction_graph::SymmMinimalistNode
update_internal_vectors()	core::pack::interaction_graph::SymmMinimalistNode	private
update_one_body_energy(int state, core::PackerEnergy energy) override	core::pack::interaction_graph::SymmOnTheFlyNode	virtual
zero_one_body_energies() override	core::pack::interaction_graph::SymmOnTheFlyNode	virtual
zero_one_body_energy(int state)	core::pack::interaction_graph::SymmOnTheFlyNode	virtual
~FixedBBNode() override	core::pack::interaction_graph::FixedBBNode	inline
~NodeBase()	core::pack::interaction_graph::NodeBase	virtual
~SymmMinimalistNode() override	core::pack::interaction_graph::SymmMinimalistNode
~SymmOnTheFlyNode() override	core::pack::interaction_graph::SymmOnTheFlyNode