| AlterSpecDisruptionDriver(utility::vector1< std::string > &pdb_file_names, bool double_mutant_scan, std::string list_file, bool output_mutant_structures) | protocols::pmut_scan::AlterSpecDisruptionDriver | |
| calculate_neighbor_table(core::pose::Pose &pose, utility::vector1< utility::vector1< bool > > &neighbors) | protocols::pmut_scan::PointMutScanDriver | |
| fill_mutations_list() | protocols::pmut_scan::PointMutScanDriver | |
| get_scorefxn() const | protocols::pmut_scan::PointMutScanDriver | |
| go() | protocols::pmut_scan::PointMutScanDriver | |
| IAM_ | protocols::pmut_scan::AlterSpecDisruptionDriver | private |
| interface_set_ | protocols::pmut_scan::AlterSpecDisruptionDriver | private |
| make_specific_mutant(utility::vector1< core::pose::Pose > &mutant_poses, utility::vector1< core::pose::Pose > &native_poses, protocols::pmut_scan::Mutant &m, std::string mutation_string="", std::string mutation_string_PDB_numbering="") | protocols::pmut_scan::PointMutScanDriver | |
| mutants_begin() const | protocols::pmut_scan::PointMutScanDriver | |
| mutants_end() const | protocols::pmut_scan::PointMutScanDriver | |
| n_mutants() const | protocols::pmut_scan::PointMutScanDriver | |
| PointMutScanDriver(utility::vector1< std::string > &pdb_file_names, bool double_mutant_scan, std::string const &list_file, bool output_mutant_structures) | protocols::pmut_scan::PointMutScanDriver | |
| read_in_structures() | protocols::pmut_scan::PointMutScanDriver | |
| reject_mutant(Mutant const &mutant, core::pose::Pose const &pose) override | protocols::pmut_scan::AlterSpecDisruptionDriver | virtual |
| reject_on_chains(Mutant const &mutant) | protocols::pmut_scan::AlterSpecDisruptionDriver | private |
| reject_on_interface(Mutant const &mutant, core::pose::Pose const &pose) | protocols::pmut_scan::AlterSpecDisruptionDriver | private |
| score(core::pose::Pose &pose) override | protocols::pmut_scan::AlterSpecDisruptionDriver | virtual |
| set_ddG_cutoff(core::Real threshold) | protocols::pmut_scan::PointMutScanDriver | |
| ~AlterSpecDisruptionDriver() override | protocols::pmut_scan::AlterSpecDisruptionDriver | |
| ~PointMutScanDriver() | protocols::pmut_scan::PointMutScanDriver | virtual |
1.8.7