protocols::seeded_abinitio::GrowPeptides Member List

This is the complete list of members for protocols::seeded_abinitio::GrowPeptides, including all inherited members.

all_ala_C	protocols::seeded_abinitio::GrowPeptides	private
all_ala_N	protocols::seeded_abinitio::GrowPeptides	private
all_seeds_	protocols::seeded_abinitio::GrowPeptides	private
anchor_specified_	protocols::seeded_abinitio::GrowPeptides	private
anchors_	protocols::seeded_abinitio::GrowPeptides	private
append_residues_cterminally(core::Size seq_register, core::Size res_pos, core::Size stop, std::string &nat_seq, core::pose::Pose &target_seeds)	protocols::seeded_abinitio::GrowPeptides	private
append_residues_nterminally(core::Size seq_register, core::Size res_pos, core::Size stop, std::string &nat_seq, core::pose::Pose &target_seeds)	protocols::seeded_abinitio::GrowPeptides	private
apply(core::pose::Pose &pose) override	protocols::seeded_abinitio::GrowPeptides	virtual
clear_info()	protocols::moves::Mover	inlinevirtual
clone() const override	protocols::seeded_abinitio::GrowPeptides	virtual
create()	protocols::moves::Mover	virtual
csequence_	protocols::seeded_abinitio::GrowPeptides	private
ddg()	protocols::seeded_abinitio::GrowPeptides
ddg_	protocols::seeded_abinitio::GrowPeptides	private
extend_cterm	protocols::seeded_abinitio::GrowPeptides	private
extend_nterm	protocols::seeded_abinitio::GrowPeptides	private
fetch_foldtree	protocols::seeded_abinitio::GrowPeptides	private
fresh_instance() const override	protocols::seeded_abinitio::GrowPeptides	virtual
get_additional_output()	protocols::moves::Mover	virtual
get_current_job() const	protocols::moves::Mover
get_current_tag() const	protocols::moves::Mover	inline
get_input_pose() const	protocols::moves::Mover
get_last_move_status() const	protocols::moves::Mover
get_name() const override	protocols::seeded_abinitio::GrowPeptides	virtual
get_native_pose() const	protocols::moves::Mover
get_self_ptr() const	protocols::moves::Mover	inline
get_self_ptr()	protocols::moves::Mover	inline
get_self_weak_ptr() const	protocols::moves::Mover	inline
get_self_weak_ptr()	protocols::moves::Mover	inline
get_type() const	protocols::moves::Mover	inline
grow_from_seeds(core::pose::Pose curr_pose, std::string sequence, protocols::loops::Loops &seeds, utility::vector1< core::Size > cutpoints)	protocols::seeded_abinitio::GrowPeptides	private
grow_from_vertices(core::pose::Pose &curr_pose, std::string sequence, protocols::loops::Loops &seeds, std::set< core::Size > vertex_set)	protocols::seeded_abinitio::GrowPeptides	private
GrowPeptides()	protocols::seeded_abinitio::GrowPeptides
info()	protocols::moves::Mover	inlinevirtual
info() const	protocols::moves::Mover	inlinevirtual
last_proposal_density_ratio()	protocols::moves::Mover	inlinevirtual
Mover()	protocols::moves::Mover
Mover(std::string const &type_name)	protocols::moves::Mover
mover_name()	protocols::seeded_abinitio::GrowPeptides	static
name()	protocols::moves::Mover	inlinestatic
nsequence_	protocols::seeded_abinitio::GrowPeptides	private
output_centroid	protocols::seeded_abinitio::GrowPeptides	private
parse_my_tag(utility::tag::TagCOP tag, basic::datacache::DataMap &) override	protocols::seeded_abinitio::GrowPeptides	virtual
Pose typedef	protocols::moves::Mover
PoseCOP typedef	protocols::moves::Mover
provide_citation_info(basic::citation_manager::CitationCollectionList &) const	protocols::moves::Mover	virtual
provide_xml_schema(utility::tag::XMLSchemaDefinition &xsd)	protocols::seeded_abinitio::GrowPeptides	static
reference_pose_	protocols::seeded_abinitio::GrowPeptides	private
register_options()	protocols::moves::Mover	inlinestatic
reinitialize_for_each_job() const	protocols::moves::Mover	virtual
reinitialize_for_new_input() const	protocols::moves::Mover	virtual
reset_status()	protocols::moves::Mover
scorefxn_	protocols::seeded_abinitio::GrowPeptides	private
seed_foldtree_	protocols::seeded_abinitio::GrowPeptides	private
seq_	protocols::seeded_abinitio::GrowPeptides	private
sequence_chunks_	protocols::seeded_abinitio::GrowPeptides	private
set_current_job(protocols::jobdist::BasicJobCOP job)	protocols::moves::Mover
set_current_tag(std::string const &new_tag)	protocols::moves::Mover	inlinevirtual
set_input_pose(PoseCOP pose)	protocols::moves::Mover	virtual
set_last_move_status(MoverStatus status)	protocols::moves::Mover	protected
set_native_pose(PoseCOP pose)	protocols::moves::Mover	virtual
set_type(std::string const &setting)	protocols::moves::Mover	inline
setup_cached_observers(core::pose::Pose &pose)	protocols::seeded_abinitio::GrowPeptides	private
show(std::ostream &output=std::cout) const	protocols::moves::Mover	virtual
Strings typedef	protocols::moves::Mover
TagCOP typedef	protocols::moves::Mover
template_pdb_	protocols::seeded_abinitio::GrowPeptides	private
template_presence	protocols::seeded_abinitio::GrowPeptides	private
test_move(Pose &pose)	protocols::moves::Mover	inlinevirtual
type(const std::string &type_in)	protocols::moves::Mover	inline
type() const	protocols::moves::Mover	inline
vertices_	protocols::seeded_abinitio::GrowPeptides	private
~GrowPeptides() override	protocols::seeded_abinitio::GrowPeptides