| build(core::pose::Pose const &pose) const | protocols::ligand_docking::InterfaceBuilder | |
| element_name() | protocols::ligand_docking::InterfaceBuilder | static |
| enforce_minimum_length(ligand_options::Interface &interface, core::pose::Pose const &pose) const | protocols::ligand_docking::InterfaceBuilder | private |
| extension_window_ | protocols::ligand_docking::InterfaceBuilder | private |
| find_interface_residues(ligand_options::Interface &interface, core::pose::Pose const &pose) const | protocols::ligand_docking::InterfaceBuilder | private |
| find_protein_residues(ligand_options::Interface &interface, core::Size ligand_residue_id, core::pose::Pose const &pose) const | protocols::ligand_docking::InterfaceBuilder | private |
| get_ligand_areas() const | protocols::ligand_docking::InterfaceBuilder | |
| InterfaceBuilder() | protocols::ligand_docking::InterfaceBuilder | |
| InterfaceBuilder(utility::vector1< LigandAreaOP > ligand_areas, core::Size extension_window=0) | protocols::ligand_docking::InterfaceBuilder | |
| InterfaceBuilder(InterfaceBuilder const &that) | protocols::ligand_docking::InterfaceBuilder | |
| is_interface_residue(core::conformation::Residue const &potential_interface_residue, core::conformation::Residue const &ligand_interface_residue, char const chain) const | protocols::ligand_docking::InterfaceBuilder | private |
| ligand_areas_ | protocols::ligand_docking::InterfaceBuilder | private |
| parse_my_tag(utility::tag::TagCOP tag, basic::datacache::DataMap &datamap) | protocols::ligand_docking::InterfaceBuilder | |
| provide_xml_schema(utility::tag::XMLSchemaDefinition &xsd) | protocols::ligand_docking::InterfaceBuilder | static |
| set_interface_residue(ligand_options::Interface &interface, core::Size const potential_interface_residue_id, core::Size const ligand_interface_residue_id, core::pose::Pose const &pose) const | protocols::ligand_docking::InterfaceBuilder | private |
| ~InterfaceBuilder() override | protocols::ligand_docking::InterfaceBuilder | |