core::select::residue_selector::JumpDownstreamSelector Class Reference

The JumpDownstreamSelector returns a ResidueSubset, i.e. a utility::vector1< bool > containing 'true' for residue positions which lie downstream of a given jump in the FoldTree. The jump is specified by an integer index. More...

#include <JumpDownstreamSelector.hh>

Inheritance diagram for core::select::residue_selector::JumpDownstreamSelector:

Public Member Functions
	JumpDownstreamSelector ()
	JumpDownstreamSelector (JumpDownstreamSelector const &src)
	Copy constructor. More...
ResidueSelectorOP	clone () const override
	Clone operator. More...
	JumpDownstreamSelector (int jump)
	~JumpDownstreamSelector () override
ResidueSubset	apply (core::pose::Pose const &pose) const override
	Return a ResidueSubset indicating a selection of Residues from the input Pose; the ResidueSubset is an array of booleans where a value of "true" for position i indicates that residue i is a part of the selected subset – and a value of "false" would indicate that it is not. More...
void	parse_my_tag (utility::tag::TagCOP tag, basic::datacache::DataMap &) override
	Initialize any data members of this instance from an input tag and a DataMap object. More...
std::string	get_name () const override
void	set_jump (int jump)
	sets the string by which residues are selected More...
Public Member Functions inherited from core::select::residue_selector::ResidueSelector
	ResidueSelector ()
	Constructor. More...
	~ResidueSelector () override
	Destructor. More...
virtual void	provide_citation_info (basic::citation_manager::CitationCollectionList &) const
	Provide citations to the passed CitationCollectionList Subclasses should add the info for themselves and any other classes they use. More...

Static Public Member Functions
static std::string	class_name ()
static void	provide_xml_schema (utility::tag::XMLSchemaDefinition &xsd)

Private Attributes
int	jump_

Detailed Description

The JumpDownstreamSelector returns a ResidueSubset, i.e. a utility::vector1< bool > containing 'true' for residue positions which lie downstream of a given jump in the FoldTree. The jump is specified by an integer index.

Constructor & Destructor Documentation

core::select::residue_selector::JumpDownstreamSelector::JumpDownstreamSelector

(

)

core::select::residue_selector::JumpDownstreamSelector::JumpDownstreamSelector

(

JumpDownstreamSelector const &

src

)

Copy constructor.

core::select::residue_selector::JumpDownstreamSelector::JumpDownstreamSelector

(

int

jump

)

References jump_.

core::select::residue_selector::JumpDownstreamSelector::~JumpDownstreamSelector ( )

overridedefault

Member Function Documentation

ResidueSubset core::select::residue_selector::JumpDownstreamSelector::apply ( core::pose::Pose const &  pose ) const

overridevirtual

Return a ResidueSubset indicating a selection of Residues from the input Pose; the ResidueSubset is an array of booleans where a value of "true" for position i indicates that residue i is a part of the selected subset – and a value of "false" would indicate that it is not.

Implements core::select::residue_selector::ResidueSelector.

References core::pose::Pose::fold_tree(), jump_, core::kinematics::FoldTree::partition_by_jump(), and core::pose::Pose::size().

std::string core::select::residue_selector::JumpDownstreamSelector::class_name ( )

static

Referenced by get_name(), core::select::residue_selector::JumpDownstreamSelectorCreator::keyname(), and provide_xml_schema().

ResidueSelectorOP core::select::residue_selector::JumpDownstreamSelector::clone ( ) const

overridevirtual

Clone operator.

Copy this object and return an owning pointer to the new object.

Implements core::select::residue_selector::ResidueSelector.

std::string core::select::residue_selector::JumpDownstreamSelector::get_name ( ) const

overridevirtual

Implements core::select::residue_selector::ResidueSelector.

References class_name().

void core::select::residue_selector::JumpDownstreamSelector::parse_my_tag ( utility::tag::TagCOP  tag, basic::datacache::DataMap &  datacache  )

overridevirtual

Initialize any data members of this instance from an input tag and a DataMap object.

Noop implementation in the base class in the case that a derived class has no need to read data from an input tag

Reimplemented from core::select::residue_selector::ResidueSelector.

References set_jump().

void core::select::residue_selector::JumpDownstreamSelector::provide_xml_schema ( utility::tag::XMLSchemaDefinition &  xsd )

static

References class_name(), and core::select::residue_selector::xsd_type_definition_w_attributes().

Referenced by core::select::residue_selector::JumpDownstreamSelectorCreator::provide_xml_schema().

void core::select::residue_selector::JumpDownstreamSelector::set_jump

(

int

jump

)

sets the string by which residues are selected

References jump_.

Referenced by parse_my_tag().

Member Data Documentation

int core::select::residue_selector::JumpDownstreamSelector::jump_

private

Referenced by apply(), JumpDownstreamSelector(), and set_jump().

---

The documentation for this class was generated from the following files:

• src/core/select/residue_selector/JumpDownstreamSelector.hh
• src/core/select/residue_selector/JumpDownstreamSelector.cc