This is the complete list of members for protocols::pockets::DarcParticleSwarmMinimizer, including all inherited members.

DarcParticleSwarmMinimizer(NonPlaidFingerprint &nfp_in, PlaidFingerprint &pfp_in, core::Real const &missing_point_weight, core::Real const &steric_weight, core::Real const &extra_point_weight, core::optimization::Multivec p_min, core::optimization::Multivec p_max)	protocols::pockets::DarcParticleSwarmMinimizer	inline
DarcPSO_elsts_score_(core::Size particle_inx, core::Size dim_x, core::Size dim_y, core::Size dim_z, core::Real mid_x, core::Real mid_y, core::Real mid_z, core::Real spacing, std::vector< std::vector< std::vector< core::Real > > > espGrid, std::vector< std::vector< std::vector< ElectrostaticpotentialGrid::PtType > > > typGrid, std::vector< basic::gpu::float4 > &atom_coors_charge)	protocols::pockets::DarcParticleSwarmMinimizer	private
DarcPSO_fp_compare_(core::Size particle_inx, core::Real const &missing_point_weight, core::Real const &steric_weight, core::Real const &extra_point_weight, utility::vector1< std::vector< basic::gpu::float4 > > &atoms, utility::vector1< std::vector< basic::gpu::float4 > > &atom_maxmin_phipsi)	protocols::pockets::DarcParticleSwarmMinimizer	private
extra_pt_	protocols::pockets::DarcParticleSwarmMinimizer	private
fill_atom_arrays_(core::Size particle_inx, core::conformation::ResidueCOP ligand_rsd, utility::vector1< std::vector< basic::gpu::float4 > > &atoms, utility::vector1< std::vector< basic::gpu::float4 > > &atom_maxmin_phipsi)	protocols::pockets::DarcParticleSwarmMinimizer	private
fill_atom_arrays_for_electrostatics_(core::Size particle_inx, core::pose::Pose ligand_pose_for_elec_calc, std::vector< basic::gpu::float4 > &atoms_coors_and_charge)	protocols::pockets::DarcParticleSwarmMinimizer	private
ligand_natoms_elstscalc_	protocols::pockets::DarcParticleSwarmMinimizer	private
ligand_natoms_shapecalc_	protocols::pockets::DarcParticleSwarmMinimizer	private
missing_pt_	protocols::pockets::DarcParticleSwarmMinimizer	private
nfp_	protocols::pockets::DarcParticleSwarmMinimizer	private
ParticleSwarmMinimizer(Multivec const &p_min, Multivec const &p_max)	core::optimization::ParticleSwarmMinimizer
pfp_	protocols::pockets::DarcParticleSwarmMinimizer	private
print_particles(ParticleOPs &particles, std::string header)	core::optimization::ParticleSwarmMinimizer
run(Size num_cycles, Multifunc &f_fitness, Size num_part=50)	core::optimization::ParticleSwarmMinimizer
run(Size num_cycles, Multifunc &f_fitness, Size num_part, Multivec init_values)	core::optimization::ParticleSwarmMinimizer
run(Size num_cycles, Multifunc &f_fitness, ParticleOPs &particles)	core::optimization::ParticleSwarmMinimizer
score_all_particles(core::optimization::Multifunc &f_fitness, core::optimization::ParticleOPs &particles) override	protocols::pockets::DarcParticleSwarmMinimizer	virtual
steric_	protocols::pockets::DarcParticleSwarmMinimizer	private
~DarcParticleSwarmMinimizer() override=default	protocols::pockets::DarcParticleSwarmMinimizer
~ParticleSwarmMinimizer() override	core::optimization::ParticleSwarmMinimizer