protocols::stepwise::monte_carlo::StepWiseMonteCarlo Member List

This is the complete list of members for protocols::stepwise::monte_carlo::StepWiseMonteCarlo, including all inherited members.

align_pose_	protocols::stepwise::monte_carlo::StepWiseMonteCarlo	private
anneal_missing(protocols::moves::MonteCarloOP monte_carlo)	protocols::stepwise::monte_carlo::StepWiseMonteCarlo	private
apply(core::pose::Pose &pose) override	protocols::stepwise::monte_carlo::StepWiseMonteCarlo	virtual
checkpoint_file_exists() const	protocols::stepwise::monte_carlo::StepWiseMonteCarlo
checkpoint_file_name() const	protocols::stepwise::monte_carlo::StepWiseMonteCarlo	private
checkpoint_file_name_low() const	protocols::stepwise::monte_carlo::StepWiseMonteCarlo	private
clear_info()	protocols::moves::Mover	inlinevirtual
clone() const	protocols::moves::Mover	virtual
create()	protocols::moves::Mover	virtual
display_progress(core::pose::Pose &pose, core::Size const cycle_num)	protocols::stepwise::monte_carlo::StepWiseMonteCarlo	private
do_main_loop(core::pose::Pose &pose)	protocols::stepwise::monte_carlo::StepWiseMonteCarlo	private
fresh_instance() const	protocols::moves::Mover	virtual
get_additional_output()	protocols::moves::Mover	virtual
get_current_job() const	protocols::moves::Mover
get_current_tag() const	protocols::moves::Mover	inline
get_input_pose() const	protocols::moves::Mover
get_last_move_status() const	protocols::moves::Mover
get_name() const override	protocols::stepwise::monte_carlo::StepWiseMonteCarlo	inlinevirtual
get_native_pose() const	protocols::moves::Mover
get_self_ptr() const	protocols::moves::Mover	inline
get_self_ptr()	protocols::moves::Mover	inline
get_self_weak_ptr() const	protocols::moves::Mover	inline
get_self_weak_ptr()	protocols::moves::Mover	inline
get_type() const	protocols::moves::Mover	inline
info()	protocols::moves::Mover	inlinevirtual
info() const	protocols::moves::Mover	inlinevirtual
initialize()	protocols::stepwise::monte_carlo::StepWiseMonteCarlo	private
initialize_for_movie(core::pose::Pose const &pose)	protocols::stepwise::monte_carlo::StepWiseMonteCarlo	private
initialize_scorefunction()	protocols::stepwise::monte_carlo::StepWiseMonteCarlo	private
last_proposal_density_ratio()	protocols::moves::Mover	inlinevirtual
master_mover() const	protocols::stepwise::monte_carlo::StepWiseMonteCarlo	inline
master_mover_	protocols::stepwise::monte_carlo::StepWiseMonteCarlo	private
max_missing_weight_	protocols::stepwise::monte_carlo::StepWiseMonteCarlo	private
missing_weight_	protocols::stepwise::monte_carlo::StepWiseMonteCarlo	private
missing_weight_interval_	protocols::stepwise::monte_carlo::StepWiseMonteCarlo	private
model_tag() const	protocols::stepwise::monte_carlo::StepWiseMonteCarlo	inline
model_tag_	protocols::stepwise::monte_carlo::StepWiseMonteCarlo	private
move() const	protocols::stepwise::monte_carlo::StepWiseMonteCarlo	inline
move_	protocols::stepwise::monte_carlo::StepWiseMonteCarlo	private
Mover()	protocols::moves::Mover
Mover(std::string const &type_name)	protocols::moves::Mover
movie_file_accepted_	protocols::stepwise::monte_carlo::StepWiseMonteCarlo	private
movie_file_trial_	protocols::stepwise::monte_carlo::StepWiseMonteCarlo	private
name()	protocols::moves::Mover	inlinestatic
options() const	protocols::stepwise::monte_carlo::StepWiseMonteCarlo	inline
options_	protocols::stepwise::monte_carlo::StepWiseMonteCarlo	private
out_file_prefix_	protocols::stepwise::monte_carlo::StepWiseMonteCarlo	private
out_path() const	protocols::stepwise::monte_carlo::StepWiseMonteCarlo	inline
out_path_	protocols::stepwise::monte_carlo::StepWiseMonteCarlo	private
output_checkpoint_file(core::pose::Pose const &pose, core::pose::Pose const &low, core::Size const k) const	protocols::stepwise::monte_carlo::StepWiseMonteCarlo
output_movie(core::pose::Pose const &pose, core::Size const k, std::string const &tag, std::string const &movie_file)	protocols::stepwise::monte_carlo::StepWiseMonteCarlo	private
parse_my_tag(TagCOP tag, basic::datacache::DataMap &data)	protocols::moves::Mover	virtual
Pose typedef	protocols::moves::Mover
pose_from_checkpoint_file() const	protocols::stepwise::monte_carlo::StepWiseMonteCarlo
pose_from_checkpoint_file_low() const	protocols::stepwise::monte_carlo::StepWiseMonteCarlo
PoseCOP typedef	protocols::moves::Mover
provide_citation_info(basic::citation_manager::CitationCollectionList &) const	protocols::moves::Mover	virtual
register_options()	protocols::moves::Mover	inlinestatic
reinitialize_for_each_job() const	protocols::moves::Mover	virtual
reinitialize_for_new_input() const	protocols::moves::Mover	virtual
remove_checkpoint_file() const	protocols::stepwise::monte_carlo::StepWiseMonteCarlo
reset_status()	protocols::moves::Mover
scorefxn_	protocols::stepwise::monte_carlo::StepWiseMonteCarlo	private
scorefxn_input_	protocols::stepwise::monte_carlo::StepWiseMonteCarlo	private
set_align_pose(core::pose::PoseCOP pose)	protocols::stepwise::monte_carlo::StepWiseMonteCarlo	inline
set_current_job(protocols::jobdist::BasicJobCOP job)	protocols::moves::Mover
set_current_tag(std::string const &new_tag)	protocols::moves::Mover	inlinevirtual
set_input_pose(PoseCOP pose)	protocols::moves::Mover	virtual
set_last_move_status(MoverStatus status)	protocols::moves::Mover	protected
set_model_tag(std::string const &setting)	protocols::stepwise::monte_carlo::StepWiseMonteCarlo	inline
set_move(mover::StepWiseMove const &setting)	protocols::stepwise::monte_carlo::StepWiseMonteCarlo	inline
set_native_pose(core::pose::PoseCOP pose) override	protocols::stepwise::monte_carlo::StepWiseMonteCarlo	virtual
set_options(options::StepWiseMonteCarloOptionsCOP options)	protocols::stepwise::monte_carlo::StepWiseMonteCarlo
set_out_file_prefix(std::string const &setting)	protocols::stepwise::monte_carlo::StepWiseMonteCarlo	inline
set_out_path(std::string const &setting)	protocols::stepwise::monte_carlo::StepWiseMonteCarlo	inline
set_submotif_library(monte_carlo::submotif::SubMotifLibraryCOP setting)	protocols::stepwise::monte_carlo::StepWiseMonteCarlo
set_type(std::string const &setting)	protocols::moves::Mover	inline
show(std::ostream &output=std::cout) const	protocols::moves::Mover	virtual
show_scores(core::pose::Pose &pose, std::string const &tag)	protocols::stepwise::monte_carlo::StepWiseMonteCarlo	private
start_time_	protocols::stepwise::monte_carlo::StepWiseMonteCarlo	private
StepWiseMonteCarlo(core::scoring::ScoreFunctionCOP scorefxn)	protocols::stepwise::monte_carlo::StepWiseMonteCarlo
Strings typedef	protocols::moves::Mover
TagCOP typedef	protocols::moves::Mover
test_move(Pose &pose)	protocols::moves::Mover	inlinevirtual
type(const std::string &type_in)	protocols::moves::Mover	inline
type() const	protocols::moves::Mover	inline
~StepWiseMonteCarlo() override	protocols::stepwise::monte_carlo::StepWiseMonteCarlo