CartesianddG.cc File Reference

#include <core/types.hh>
#include <core/chemical/AA.hh>
#include <core/conformation/Residue.hh>
#include <core/conformation/util.hh>
#include <core/conformation/Conformation.hh>
#include <core/kinematics/MoveMap.hh>
#include <core/kinematics/FoldTree.hh>
#include <core/scoring/ScoreFunction.hh>
#include <core/scoring/ScoreFunctionFactory.hh>
#include <core/scoring/Energies.hh>
#include <core/pack/task/PackerTask.hh>
#include <core/pack/task/TaskFactory.hh>
#include <core/pose/Pose.hh>
#include <core/pose/symmetry/util.hh>
#include <core/pose/PDBInfo.hh>
#include <core/fragment/FragSet.hh>
#include <core/fragment/Frame.hh>
#include <core/select/residue_selector/ResidueSelector.hh>
#include <core/select/residue_selector/ResidueIndexSelector.hh>
#include <core/optimization/MinimizerOptions.hh>
#include <core/optimization/CartesianMinimizer.hh>
#include <core/optimization/AtomTreeMinimizer.hh>
#include <basic/options/util.hh>
#include <basic/options/after_opts.hh>
#include <basic/options/option_macros.hh>
#include <basic/options/keys/OptionKeys.hh>
#include <basic/options/keys/ddg.OptionKeys.gen.hh>
#include <basic/options/keys/in.OptionKeys.gen.hh>
#include <basic/options/keys/score.OptionKeys.gen.hh>
#include <basic/options/keys/packing.OptionKeys.gen.hh>
#include <basic/database/open.hh>
#include <numeric/xyzVector.hh>
#include <numeric/xyz.functions.hh>
#include <fstream>
#include <iostream>
#include <sstream>
#include <cstdlib>
#include <string>
#include <ObjexxFCL/format.hh>
#include <protocols/ddg/ddGMover.hh>
#include <protocols/scoring/Interface.hh>
#include <protocols/minimization_packing/PackRotamersMover.hh>
#include <protocols/constraint_movers/AddConstraintsToCurrentConformationMover.hh>
#include <protocols/relax/FastRelax.hh>
#include <protocols/rigid/RigidBodyMover.hh>
#include <protocols/toolbox/pose_manipulation/pose_manipulation.hh>
#include <protocols/hybridization/util.hh>
#include <protocols/hybridization/CartesianSampler.hh>
#include <protocols/ddg/CartesianddG.hh>
#include <utility/json_utilities.hh>
#include <utility/vector0.hh>
#include <utility/vector1.hh>
#include <utility/exit.hh>
#include <utility/excn/Exceptions.hh>
#include <utility/file/FileName.hh>
#include <utility/file/file_sys_util.hh>
#include <utility/io/izstream.hh>
#include <utility/io/ozstream.hh>
#include <basic/Tracer.hh>

Namespaces
	protocols
	The instance of Loops contained by AbrelaxApplication should be replaced by a LoopsOP.
	protocols::ddg
	protocols::ddg::CartesianddG

Functions
static basic::Tracer	protocols::ddg::CartesianddG::TR ("protocols.CartesianddG")

Detailed Description

Author

Brandon Frenz

Frank DiMaio

Hahnbeom Park