DihedralConstraintGenerator.cc File Reference

A cst generator that creates Dihedral constraints for specified residues using a residue selector. More...

#include <protocols/constraint_generator/DihedralConstraintGenerator.hh>
#include <protocols/constraint_generator/DihedralConstraintGeneratorCreator.hh>
#include <protocols/constraint_generator/ConstraintGeneratorFactory.hh>
#include <protocols/constraint_generator/util.hh>
#include <core/pose/Pose.hh>
#include <core/pose/selection.hh>
#include <core/conformation/Residue.hh>
#include <core/conformation/carbohydrates/util.hh>
#include <core/conformation/Conformation.hh>
#include <core/id/AtomID.hh>
#include <core/id/TorsionID.hh>
#include <core/id/SequenceMapping.hh>
#include <core/select/residue_selector/util.hh>
#include <core/select/residue_selector/ResidueSelector.hh>
#include <core/scoring/constraints/Constraint.hh>
#include <core/scoring/constraints/ConstraintIO.hh>
#include <core/scoring/constraints/ConstraintSet.hh>
#include <core/scoring/constraints/DihedralConstraint.hh>
#include <core/scoring/func/CircularHarmonicFunc.hh>
#include <core/scoring/constraints/util.hh>
#include <protocols/rosetta_scripts/util.hh>
#include <numeric/conversions.hh>
#include <basic/Tracer.hh>
#include <basic/citation_manager/CitationCollection.hh>
#include <basic/citation_manager/UnpublishedModuleInfo.hh>
#include <utility/tag/Tag.hh>
#include <utility/tag/XMLSchemaGeneration.hh>
#include <utility/string_util.hh>
#include <numeric/xyz.functions.hh>
#include <numeric/xyzVector.io.hh>

Namespaces
	protocols
	The instance of Loops contained by AbrelaxApplication should be replaced by a LoopsOP.
	protocols::constraint_generator

Functions
static basic::Tracer	TR ("protocols.constraint_generator.DihedralConstraintGenerator")
utility::vector1 < core::id::AtomID >	protocols::constraint_generator::parse_custom_torsion (std::string const &atom_names_list, std::string const &resnums, core::pose::Pose const &pose)
	Turn two strings, comma-separated with atom names and resnums into a custom dihedral vector. More...
core::id::MainchainTorsionType	protocols::constraint_generator::parse_torsion_type (std::string const &dih)
	Get the MainchainTorsionType from a string (phi/psi/omega/omega2/omega3). More...

Detailed Description

A cst generator that creates Dihedral constraints for specified residues using a residue selector.

Author

Jared Adolf-Bryfogle (jadol.nosp@m.fbr@.nosp@m.gmail.nosp@m..com)

Function Documentation

static basic::Tracer TR ( "protocols.constraint_generator.DihedralConstraintGenerator"  )

static