| add_mainchain_segments(utility::vector1< core::id::AtomID > atomids, core::Size min_atoms, core::Size max_atoms) | protocols::backrub::BackrubMover | |
| add_mainchain_segments(utility::vector1< core::Size > resnums, utility::vector1< std::string > atomnames, core::Size min_atoms, core::Size max_atoms) | protocols::backrub::BackrubMover | |
| add_mainchain_segments(Pose const &pose) | protocols::backrub::BackrubMover | |
| add_mainchain_segments_from_options(Pose const &pose) | protocols::backrub::BackrubMover | |
| add_segment(core::id::AtomID start_atomid, core::id::AtomID end_atomid, core::Real max_angle_disp=0) | protocols::backrub::BackrubMover | |
| apply(Pose &pose) override | protocols::backrub::BackrubMover | virtual |
| BackrubMover() | protocols::backrub::BackrubMover | |
| BackrubMover(BackrubMover const &mover) | protocols::backrub::BackrubMover | |
| bond_angle_map_ | protocols::backrub::BackrubMover | private |
| branchopt() | protocols::backrub::BackrubMover | inline |
| branchopt_ | protocols::backrub::BackrubMover | private |
| clear_info() | protocols::moves::Mover | inlinevirtual |
| clear_segments() | protocols::backrub::BackrubMover | inline |
| clone() const override | protocols::backrub::BackrubMover | virtual |
| complex_type_generator_for_backrub_mover(utility::tag::XMLSchemaDefinition &xsd) | protocols::backrub::BackrubMover | static |
| create() | protocols::moves::Mover | virtual |
| custom_angle() const | protocols::backrub::BackrubMover | virtual |
| custom_angle_ | protocols::backrub::BackrubMover | private |
| dof_id_ranges(core::pose::Pose &pose) override | protocols::backrub::BackrubMover | virtual |
| finalize_simulation(core::pose::Pose &pose, protocols::canonical_sampling::MetropolisHastingsMover const &metropolis_hastings_mover) | protocols::canonical_sampling::ThermodynamicMover | virtual |
| fresh_instance() const override | protocols::backrub::BackrubMover | virtual |
| get_additional_output() | protocols::moves::Mover | virtual |
| get_current_job() const | protocols::moves::Mover | |
| get_current_tag() const | protocols::moves::Mover | inline |
| get_input_pose() const | protocols::moves::Mover | |
| get_last_move_status() const | protocols::moves::Mover | |
| get_name() const override | protocols::backrub::BackrubMover | virtual |
| get_native_pose() const | protocols::moves::Mover | |
| get_self_ptr() const | protocols::moves::Mover | inline |
| get_self_ptr() | protocols::moves::Mover | inline |
| get_self_weak_ptr() const | protocols::moves::Mover | inline |
| get_self_weak_ptr() | protocols::moves::Mover | inline |
| get_type() const | protocols::moves::Mover | inline |
| has_segment(core::id::AtomID start_atomid, core::id::AtomID end_atomid) | protocols::backrub::BackrubMover | inline |
| info() | protocols::moves::Mover | inlinevirtual |
| info() const | protocols::moves::Mover | inlinevirtual |
| init_with_options() | protocols::backrub::BackrubMover | |
| initialize_simulation(core::pose::Pose &pose, protocols::canonical_sampling::MetropolisHastingsMover const &metropolis_hastings_mover, core::Size cycle) override | protocols::backrub::BackrubMover | virtual |
| is_multi_trial() | protocols::canonical_sampling::ThermodynamicMover | virtual |
| last_angle() const | protocols::backrub::BackrubMover | |
| last_angle_ | protocols::backrub::BackrubMover | private |
| last_end_atom_name() const | protocols::backrub::BackrubMover | |
| last_end_atom_name_ | protocols::backrub::BackrubMover | private |
| last_inner_score_delta_over_temperature() | protocols::canonical_sampling::ThermodynamicMover | virtual |
| last_proposal_density_ratio() override | protocols::canonical_sampling::ThermodynamicMover | virtual |
| last_segment_id() const | protocols::backrub::BackrubMover | |
| last_segment_id_ | protocols::backrub::BackrubMover | private |
| last_start_atom_name() const | protocols::backrub::BackrubMover | |
| last_start_atom_name_ | protocols::backrub::BackrubMover | private |
| max_angle_disp_4() const | protocols::backrub::BackrubMover | |
| max_angle_disp_4_ | protocols::backrub::BackrubMover | private |
| max_angle_disp_7() const | protocols::backrub::BackrubMover | |
| max_angle_disp_7_ | protocols::backrub::BackrubMover | private |
| max_angle_disp_slope() const | protocols::backrub::BackrubMover | |
| max_angle_disp_slope_ | protocols::backrub::BackrubMover | private |
| max_atoms() const | protocols::backrub::BackrubMover | |
| max_atoms_ | protocols::backrub::BackrubMover | private |
| metropolis_hastings_mover() | protocols::canonical_sampling::ThermodynamicMover | virtual |
| min_atoms() const | protocols::backrub::BackrubMover | |
| min_atoms_ | protocols::backrub::BackrubMover | private |
| movemap_ | protocols::backrub::BackrubMover | private |
| movemap_factory_ | protocols::backrub::BackrubMover | private |
| Mover() | protocols::moves::Mover | |
| Mover(std::string const &type_name) | protocols::moves::Mover | |
| mover_name() | protocols::backrub::BackrubMover | static |
| name() | protocols::moves::Mover | inlinestatic |
| next_angle() const | protocols::backrub::BackrubMover | |
| next_angle_ | protocols::backrub::BackrubMover | private |
| next_segment_id() const | protocols::backrub::BackrubMover | |
| next_segment_id_ | protocols::backrub::BackrubMover | private |
| num_segments() | protocols::backrub::BackrubMover | inline |
| observe_after_metropolis(protocols::canonical_sampling::MetropolisHastingsMover const &metropolis_hastings_mover) | protocols::canonical_sampling::ThermodynamicMover | virtual |
| optimize_branch_angles(Pose &pose) | protocols::backrub::BackrubMover | |
| parse_movemap_factory(utility::tag::TagCOP tag, basic::datacache::DataMap &data) | protocols::backrub::BackrubMover | |
| parse_my_tag(utility::tag::TagCOP tag, basic::datacache::DataMap &data) override | protocols::backrub::BackrubMover | virtual |
| pivot_atoms() const | protocols::backrub::BackrubMover | |
| pivot_atoms_ | protocols::backrub::BackrubMover | private |
| pivot_residue_selector_ | protocols::backrub::BackrubMover | private |
| pivot_residues(Pose const &pose) const | protocols::backrub::BackrubMover | |
| pivot_residues_ | protocols::backrub::BackrubMover | private |
| Pose typedef | protocols::moves::Mover | |
| PoseCOP typedef | protocols::moves::Mover | |
| preserve_detailed_balance() const override | protocols::backrub::BackrubMover | virtual |
| preserve_detailed_balance_ | protocols::backrub::BackrubMover | private |
| provide_citation_info(basic::citation_manager::CitationCollectionList &) const | protocols::moves::Mover | virtual |
| provide_xml_schema(utility::tag::XMLSchemaDefinition &xsd) | protocols::backrub::BackrubMover | static |
| random_angle(Pose &pose, core::Size segment_id, utility::vector0< core::Real > &start_constants, utility::vector0< core::Real > &end_constants) | protocols::backrub::BackrubMover | |
| register_options() | protocols::moves::Mover | inlinestatic |
| reinitialize_for_each_job() const | protocols::moves::Mover | virtual |
| reinitialize_for_new_input() const | protocols::moves::Mover | virtual |
| require_mm_bend() const | protocols::backrub::BackrubMover | |
| require_mm_bend_ | protocols::backrub::BackrubMover | private |
| reset_status() | protocols::moves::Mover | |
| rotate_segment(Pose &pose, core::Size segment_id, core::Real angle, utility::vector0< core::Real > &start_constants, utility::vector0< core::Real > &end_constants) | protocols::backrub::BackrubMover | |
| segment(core::Size segment_id) | protocols::backrub::BackrubMover | inline |
| segment_id(core::id::AtomID start_atomid, core::id::AtomID end_atomid) | protocols::backrub::BackrubMover | inline |
| segments_ | protocols::backrub::BackrubMover | private |
| set_current_job(protocols::jobdist::BasicJobCOP job) | protocols::moves::Mover | |
| set_current_tag(std::string const &new_tag) | protocols::moves::Mover | inlinevirtual |
| set_custom_angle(bool custom_angle) | protocols::backrub::BackrubMover | virtual |
| set_input_pose(PoseCOP pose) | protocols::moves::Mover | virtual |
| set_last_move_status(MoverStatus status) | protocols::moves::Mover | protected |
| set_max_angle_disp_4(core::Real max_angle_disp_4) | protocols::backrub::BackrubMover | |
| set_max_angle_disp_7(core::Real max_angle_disp_7) | protocols::backrub::BackrubMover | |
| set_max_angle_disp_slope(core::Real max_angle_disp_slope) | protocols::backrub::BackrubMover | |
| set_max_atoms(core::Size max_atoms) | protocols::backrub::BackrubMover | |
| set_metropolis_hastings_mover(protocols::canonical_sampling::MetropolisHastingsMoverAP metropolis_hastings_mover) | protocols::canonical_sampling::ThermodynamicMover | virtual |
| set_min_atoms(core::Size min_atoms) | protocols::backrub::BackrubMover | |
| set_movemap(core::kinematics::MoveMapCOP movemap) | protocols::backrub::BackrubMover | |
| set_movemap_factory(core::select::movemap::MoveMapFactoryCOP mmf) | protocols::backrub::BackrubMover | virtual |
| set_native_pose(PoseCOP pose) | protocols::moves::Mover | virtual |
| set_next_angle(core::Real next_angle) | protocols::backrub::BackrubMover | |
| set_next_segment_id(core::Size next_segment_id) | protocols::backrub::BackrubMover | |
| set_pivot_atoms(utility::vector1< std::string > const &pivot_atoms) | protocols::backrub::BackrubMover | |
| set_pivot_residue_selector(core::select::residue_selector::ResidueSelectorCOP pivot_residues) | protocols::backrub::BackrubMover | |
| set_pivot_residues(utility::vector1< core::Size > const &pivot_residues) | protocols::backrub::BackrubMover | |
| set_preserve_detailed_balance(bool preserve_detailed_balance) override | protocols::backrub::BackrubMover | virtual |
| set_require_mm_bend(bool require_mm_bend) | protocols::backrub::BackrubMover | |
| set_type(std::string const &setting) | protocols::moves::Mover | inline |
| show(std::ostream &output=std::cout) const | protocols::moves::Mover | virtual |
| Strings typedef | protocols::moves::Mover | |
| TagCOP typedef | protocols::moves::Mover | |
| test_move(Pose &pose) | protocols::moves::Mover | inlinevirtual |
| ThermodynamicMover() | protocols::canonical_sampling::ThermodynamicMover | |
| torsion_id_ranges(core::pose::Pose &pose) override | protocols::backrub::BackrubMover | virtual |
| type(const std::string &type_in) | protocols::moves::Mover | inline |
| type() const | protocols::moves::Mover | inline |
| update_type() | protocols::backrub::BackrubMover | |
| ~ThermodynamicMover() override | protocols::canonical_sampling::ThermodynamicMover | |
1.8.7