GlycanTreeMinMover.cc File Reference

A class that selects the downstream branch from residues in a movemap/selector, and minimizes those residues if on in the primary glycan movemap. Multiple Applies randomly select a different residue in the movemap/selector. More...

#include <protocols/carbohydrates/GlycanTreeMinMover.hh>
#include <protocols/carbohydrates/GlycanTreeMinMoverCreator.hh>
#include <core/select/residue_selector/GlycanResidueSelector.hh>
#include <core/select/residue_selector/util.hh>
#include <protocols/minimization_packing/MinMover.hh>
#include <core/pose/Pose.hh>
#include <core/pose/carbohydrates/util.hh>
#include <core/pose/PDBInfo.hh>
#include <core/kinematics/util.hh>
#include <core/select/residue_selector/ResidueSelector.hh>
#include <core/select/residue_selector/AndResidueSelector.hh>
#include <core/kinematics/MoveMap.hh>
#include <core/scoring/ScoreFunctionFactory.hh>
#include <core/conformation/Residue.hh>
#include <core/pose/symmetry/util.hh>
#include <core/io/pdb/pdb_writer.hh>
#include <core/io/StructFileRepOptions.hh>
#include <core/optimization/MinimizerOptions.hh>
#include <basic/Tracer.hh>
#include <utility/tag/Tag.hh>
#include <basic/options/option.hh>
#include <basic/options/keys/run.OptionKeys.gen.hh>
#include <basic/citation_manager/CitationManager.hh>
#include <basic/citation_manager/CitationCollection.hh>
#include <basic/citation_manager/UnpublishedModuleInfo.hh>
#include <numeric/random/random.hh>
#include <utility/tag/XMLSchemaGeneration.hh>
#include <protocols/moves/mover_schemas.hh>
#include <protocols/rosetta_scripts/util.hh>
#include <iostream>
#include <sstream>
#include <fstream>

Namespaces
	protocols
	The instance of Loops contained by AbrelaxApplication should be replaced by a LoopsOP.
	protocols::carbohydrates

Functions
static basic::Tracer	TR ("protocols.carbohydrates.GlycanTreeMinMover")

Detailed Description

A class that selects the downstream branch from residues in a movemap/selector, and minimizes those residues if on in the primary glycan movemap. Multiple Applies randomly select a different residue in the movemap/selector.

Author

Jared Adolf-Bryfogle (jadol.nosp@m.fbr@.nosp@m.gmail.nosp@m..com)

Function Documentation

static basic::Tracer TR ( "protocols.carbohydrates.GlycanTreeMinMover"  )

static