protocols::abinitio::PairingStatEntry Class Reference

#include <PairingStatistics.hh>

Public Types
typedef std::string	Model
typedef utility::vector1< Model >	ModelList

Public Member Functions
	PairingStatEntry ()
	PairingStatEntry (core::scoring::dssp::StrandPairing const &strand, Model const &id)
core::Size	frequency () const
bool	add_pairing (core::scoring::dssp::StrandPairing const &, Model const &)
bool	compatible (core::scoring::dssp::StrandPairing const &) const
void	show (std::ostream &) const
void	set_weight (core::Real setting)
core::Real	weight () const
core::Size	size () const
core::Size	contact_order () const
core::scoring::dssp::StrandPairing const &	pairing () const
ModelList const &	models () const
ModelList &	models ()
bool	has_model (std::string const &) const
bool	operator== (PairingStatEntry const &other) const
bool	operator!= (PairingStatEntry const &other) const

Private Attributes
ModelList	models_
core::scoring::dssp::StrandPairing	strand_pairing_
core::Real	weight_

Friends
std::istream &	operator>> (std::istream &is, PairingStatEntry &ps)

Member Typedef Documentation

typedef std::string protocols::abinitio::PairingStatEntry::Model

typedef utility::vector1< Model > protocols::abinitio::PairingStatEntry::ModelList

Constructor & Destructor Documentation

protocols::abinitio::PairingStatEntry::PairingStatEntry ( )

default

protocols::abinitio::PairingStatEntry::PairingStatEntry	(	core::scoring::dssp::StrandPairing const &	strand,
		Model const &	id
	)

References models_.

Member Function Documentation

bool protocols::abinitio::PairingStatEntry::add_pairing	(	core::scoring::dssp::StrandPairing const &	new_strand,
		Model const &	id
	)

References core::scoring::dssp::StrandPairing::merge(), models_, and strand_pairing_.

bool protocols::abinitio::PairingStatEntry::compatible

(

core::scoring::dssp::StrandPairing const &

strand

)

const

References core::scoring::dssp::StrandPairing::mergeable(), and strand_pairing_.

core::Size protocols::abinitio::PairingStatEntry::contact_order ( ) const

inline

References core::scoring::dssp::StrandPairing::contact_order(), and pairing().

core::Size protocols::abinitio::PairingStatEntry::frequency ( ) const

inline

References models_.

Referenced by show().

bool protocols::abinitio::PairingStatEntry::has_model

(

std::string const &

model

)

const

References models_.

ModelList const& protocols::abinitio::PairingStatEntry::models ( ) const

inline

References models_.

Referenced by protocols::abinitio::AlternativePairings::add_pairing(), and protocols::abinitio::operator>>().

ModelList& protocols::abinitio::PairingStatEntry::models ( )

inline

References models_.

bool protocols::abinitio::PairingStatEntry::operator!=

(

PairingStatEntry const &

other

)

const

References core::scoring::dssp::StrandPairing::mergeable(), pairing(), and strand_pairing_.

bool protocols::abinitio::PairingStatEntry::operator==

(

PairingStatEntry const &

other

)

const

References core::scoring::dssp::StrandPairing::mergeable(), pairing(), and strand_pairing_.

core::scoring::dssp::StrandPairing const& protocols::abinitio::PairingStatEntry::pairing ( ) const

inline

References strand_pairing_.

Referenced by protocols::abinitio::AlternativePairings::add_pairing(), contact_order(), protocols::abinitio::hash_value(), operator!=(), operator==(), and protocols::abinitio::operator>>().

void protocols::abinitio::PairingStatEntry::set_weight ( core::Real  setting )

inline

References weight_.

Referenced by protocols::abinitio::operator>>().

void protocols::abinitio::PairingStatEntry::show

(

std::ostream &

out

)

const

References core::chemical::element::F, frequency(), models_, core::scoring::dssp::StrandPairing::range_check(), strand_pairing_, tr(), and weight().

Referenced by protocols::abinitio::operator<<().

core::Size protocols::abinitio::PairingStatEntry::size ( ) const

inline

References core::scoring::dssp::StrandPairing::size(), and strand_pairing_.

core::Real protocols::abinitio::PairingStatEntry::weight ( ) const

inline

References weight_.

Referenced by show().

Friends And Related Function Documentation

std::istream& operator>> ( std::istream &  is, PairingStatEntry &  ps  )

friend

Member Data Documentation

ModelList protocols::abinitio::PairingStatEntry::models_

private

Referenced by add_pairing(), frequency(), has_model(), models(), protocols::abinitio::operator>>(), PairingStatEntry(), and show().

core::scoring::dssp::StrandPairing protocols::abinitio::PairingStatEntry::strand_pairing_

private

Referenced by add_pairing(), compatible(), operator!=(), operator==(), protocols::abinitio::operator>>(), pairing(), show(), and size().

core::Real protocols::abinitio::PairingStatEntry::weight_

private

Referenced by protocols::abinitio::operator>>(), set_weight(), and weight().

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The documentation for this class was generated from the following files:

• src/protocols/abinitio/PairingStatistics.hh
• src/protocols/abinitio/PairingStatistics.cc