PDBOutput.cc File Reference

#include <protocols/dna/PDBOutput.hh>
#include <protocols/jd2/Job.hh>
#include <protocols/dna/util.hh>
#include <protocols/dna/DnaInterfaceFinder.hh>
#include <protocols/simple_pose_metric_calculators/BuriedUnsatisfiedPolarsCalculator.hh>
#include <protocols/pose_metric_calculators/PackstatCalculator.hh>
#include <core/chemical/ResidueType.hh>
#include <core/conformation/Residue.hh>
#include <basic/options/option.hh>
#include <core/pack/task/PackerTask.hh>
#include <core/pose/Pose.hh>
#include <core/pose/PDBInfo.hh>
#include <core/scoring/Energies.hh>
#include <core/scoring/ScoreFunction.hh>
#include <core/scoring/ScoreFunctionFactory.hh>
#include <core/scoring/hbonds/HBondSet.hh>
#include <core/scoring/hbonds/hbonds.hh>
#include <core/scoring/hbonds/hbonds_geom.hh>
#include <core/scoring/ScoreType.hh>
#include <core/scoring/ScoreTypeManager.hh>
#include <basic/MetricValue.hh>
#include <basic/Tracer.hh>
#include <utility/vector1.hh>
#include <utility/file/file_sys_util.hh>
#include <utility/file/gzip_util.hh>
#include <utility/string_util.hh>
#include <algorithm>
#include <iostream>
#include <fstream>
#include <basic/options/keys/dna.OptionKeys.gen.hh>
#include <basic/options/keys/score.OptionKeys.gen.hh>
#include <basic/options/keys/run.OptionKeys.gen.hh>
#include <core/chemical/AtomType.hh>
#include <utility/io/ozstream.hh>
#include <ObjexxFCL/format.hh>

Namespaces
	protocols
	The instance of Loops contained by AbrelaxApplication should be replaced by a LoopsOP.
	protocols::dna

Functions
static basic::Tracer	protocols::dna::TR ("protocols.dna.PDBOutput", t_info)
std::string	protocols::dna::string_join (PDBOutput::Strings const &list, std::string const &sep=", ")
void	protocols::dna::make_subdirs (std::string const &name)