| add_bond_angle_constraint(core::id::AtomID const &atom_id1, core::id::AtomID const &atom_id2, core::id::AtomID const &atom_id3, utility::vector1< std::pair< core::id::AtomID, std::pair< core::id::AtomID, core::id::AtomID > > > &bond_angle_list, core::pose::Pose const &pose, core::pose::Pose const &pose_reference, core::scoring::constraints::ConstraintSetOP &cst_set) const | protocols::simple_moves::ConstrainToIdealMover | private |
| add_bond_dihedral_constraint(core::id::AtomID const &atom_id1, core::id::AtomID const &atom_id2, core::id::AtomID const &atom_id3, core::id::AtomID const &atom_id4, core::pose::Pose const &pose, core::pose::Pose const &pose_reference, core::scoring::constraints::ConstraintSetOP &cst_set) const | protocols::simple_moves::ConstrainToIdealMover | private |
| add_bond_length_constraint(core::id::AtomID const &atom_id1, core::id::AtomID const &atom_id2, utility::vector1< std::pair< core::id::AtomID, core::id::AtomID > > &bonded_atom_list, core::pose::Pose const &pose, core::pose::Pose const &pose_reference, core::scoring::constraints::ConstraintSetOP &cst_set) const | protocols::simple_moves::ConstrainToIdealMover | private |
| apply(core::pose::Pose &pose) override | protocols::simple_moves::ConstrainToIdealMover | virtual |
| apply(core::pose::Pose &pose, core::kinematics::MoveMap &mm) | protocols::simple_moves::ConstrainToIdealMover | |
| atom_level_domain_map_ | protocols::simple_moves::ConstrainToIdealMover | private |
| bond_angle_sd_ | protocols::simple_moves::ConstrainToIdealMover | private |
| bond_angle_sd_polar_hydrogen_ | protocols::simple_moves::ConstrainToIdealMover | private |
| bond_length_sd_ | protocols::simple_moves::ConstrainToIdealMover | private |
| bond_length_sd_polar_hydrogen_ | protocols::simple_moves::ConstrainToIdealMover | private |
| bond_torsion_sd_ | protocols::simple_moves::ConstrainToIdealMover | private |
| bond_torsion_sd_polar_hydrogen_ | protocols::simple_moves::ConstrainToIdealMover | private |
| check_if_really_connected(core::pose::Pose const &pose, core::id::AtomID const &atom_id1, core::id::AtomID const &atom_id2) const | protocols::simple_moves::ConstrainToIdealMover | private |
| check_in_bond_angle_list(core::id::AtomID const &atom_id1, core::id::AtomID const &atom_id2, core::id::AtomID const &atom_id3, utility::vector1< std::pair< core::id::AtomID, std::pair< core::id::AtomID, core::id::AtomID > > > &bond_angle_list) const | protocols::simple_moves::ConstrainToIdealMover | private |
| check_in_bonded_list(core::id::AtomID const &atom_id1, core::id::AtomID const &atom_id2, utility::vector1< std::pair< core::id::AtomID, core::id::AtomID > > &bonded_atom_list) const | protocols::simple_moves::ConstrainToIdealMover | private |
| clear_info() | protocols::moves::Mover | inlinevirtual |
| clone() const override | protocols::simple_moves::ConstrainToIdealMover | virtual |
| ConstrainToIdealMover() | protocols::simple_moves::ConstrainToIdealMover | |
| create() | protocols::moves::Mover | virtual |
| create_pose_reference(core::pose::Pose const &pose, core::pose::Pose &pose_reference) | protocols::simple_moves::ConstrainToIdealMover | privatevirtual |
| disallow_vary_geometry_proton_chi_ | protocols::simple_moves::ConstrainToIdealMover | private |
| fix_angles_ | protocols::simple_moves::ConstrainToIdealMover | private |
| fix_lengths_ | protocols::simple_moves::ConstrainToIdealMover | private |
| fix_torsions_ | protocols::simple_moves::ConstrainToIdealMover | private |
| fresh_instance() const override | protocols::simple_moves::ConstrainToIdealMover | virtual |
| get_additional_output() | protocols::moves::Mover | virtual |
| get_atom_level_domain_map() const | protocols::simple_moves::ConstrainToIdealMover | |
| get_current_job() const | protocols::moves::Mover | |
| get_current_tag() const | protocols::moves::Mover | inline |
| get_input_pose() const | protocols::moves::Mover | |
| get_last_move_status() const | protocols::moves::Mover | |
| get_name() const override | protocols::simple_moves::ConstrainToIdealMover | virtual |
| get_native_pose() const | protocols::moves::Mover | |
| get_self_ptr() const | protocols::moves::Mover | inline |
| get_self_ptr() | protocols::moves::Mover | inline |
| get_self_weak_ptr() const | protocols::moves::Mover | inline |
| get_self_weak_ptr() | protocols::moves::Mover | inline |
| get_type() const | protocols::moves::Mover | inline |
| i_want_this_atom_to_move(core::pose::Pose const &pose, core::id::AtomID const &atom_id) const | protocols::simple_moves::ConstrainToIdealMover | privatevirtual |
| i_want_this_atom_to_move(core::conformation::Residue const &residue2, core::Size const &k) const | protocols::simple_moves::ConstrainToIdealMover | privatevirtual |
| info() | protocols::moves::Mover | inlinevirtual |
| info() const | protocols::moves::Mover | inlinevirtual |
| just_polar_hydrogens_ | protocols::simple_moves::ConstrainToIdealMover | private |
| just_rna_backbone_ | protocols::simple_moves::ConstrainToIdealMover | private |
| last_proposal_density_ratio() | protocols::moves::Mover | inlinevirtual |
| legacy_dof_allow_move_ | protocols::simple_moves::ConstrainToIdealMover | private |
| Mover() | protocols::moves::Mover | |
| Mover(std::string const &type_name) | protocols::moves::Mover | |
| name() | protocols::moves::Mover | inlinestatic |
| operator=(ConstrainToIdealMover const &rhs) | protocols::simple_moves::ConstrainToIdealMover | |
| parse_my_tag(TagCOP tag, basic::datacache::DataMap &data) | protocols::moves::Mover | virtual |
| Pose typedef | protocols::moves::Mover | |
| PoseCOP typedef | protocols::moves::Mover | |
| provide_citation_info(basic::citation_manager::CitationCollectionList &) const | protocols::moves::Mover | virtual |
| register_options() | protocols::moves::Mover | inlinestatic |
| reinitialize_for_each_job() const | protocols::moves::Mover | virtual |
| reinitialize_for_new_input() const | protocols::moves::Mover | virtual |
| reset_status() | protocols::moves::Mover | |
| score_type_ | protocols::simple_moves::ConstrainToIdealMover | private |
| set_atom_level_domain_map(core::pose::toolbox::AtomLevelDomainMapCOP atom_level_domain_map) | protocols::simple_moves::ConstrainToIdealMover | |
| set_current_job(protocols::jobdist::BasicJobCOP job) | protocols::moves::Mover | |
| set_current_tag(std::string const &new_tag) | protocols::moves::Mover | inlinevirtual |
| set_fix_angles(bool const &setting) | protocols::simple_moves::ConstrainToIdealMover | inline |
| set_fix_lengths(bool const &setting) | protocols::simple_moves::ConstrainToIdealMover | inline |
| set_fix_torsions(bool const &setting) | protocols::simple_moves::ConstrainToIdealMover | inline |
| set_input_pose(PoseCOP pose) | protocols::moves::Mover | virtual |
| set_just_polar_hydrogens(bool const setting) | protocols::simple_moves::ConstrainToIdealMover | inline |
| set_just_rna_backbone(bool const setting) | protocols::simple_moves::ConstrainToIdealMover | inline |
| set_last_move_status(MoverStatus status) | protocols::moves::Mover | protected |
| set_native_pose(PoseCOP pose) | protocols::moves::Mover | virtual |
| set_score_type(core::scoring::ScoreType const setting) | protocols::simple_moves::ConstrainToIdealMover | |
| set_type(std::string const &setting) | protocols::moves::Mover | inline |
| show(std::ostream &output=std::cout) const | protocols::moves::Mover | virtual |
| Strings typedef | protocols::moves::Mover | |
| TagCOP typedef | protocols::moves::Mover | |
| test_move(Pose &pose) | protocols::moves::Mover | inlinevirtual |
| type(const std::string &type_in) | protocols::moves::Mover | inline |
| type() const | protocols::moves::Mover | inline |
| vary_bond_geometry(core::pose::Pose &pose, core::kinematics::MoveMap &mm, core::pose::Pose const &pose_reference) const | protocols::simple_moves::ConstrainToIdealMover | private |
| verbose_ | protocols::simple_moves::ConstrainToIdealMover | private |
| ~ConstrainToIdealMover() override | protocols::simple_moves::ConstrainToIdealMover | |
1.8.7