protocols::ncbb::oop Namespace Reference

Classes
class	OopCreatorMover
class	OopCreatorMoverCreator
class	OopDockDesignProtocol
class	OopDockDesignProtocolCreator

Typedefs
typedef utility::pointer::shared_ptr < OopCreatorMover >	OopCreatorMoverOP
typedef utility::pointer::shared_ptr < OopCreatorMover const >	OopCreatorMoverCOP
typedef utility::pointer::shared_ptr < OopCreatorMoverCreator >	OopCreatorMoverCreatorOP
typedef utility::pointer::shared_ptr < OopCreatorMoverCreator const >	OopCreatorMoverCreatorCOP
typedef utility::pointer::shared_ptr < OopDockDesignProtocol >	OopDockDesignProtocolOP
typedef utility::pointer::shared_ptr < OopDockDesignProtocol const >	OopDockDesignProtocolCOP
typedef utility::pointer::shared_ptr < OopDockDesignProtocolCreator >	OopDockDesignProtocolCreatorOP
typedef utility::pointer::shared_ptr < OopDockDesignProtocolCreator const >	OopDockDesignProtocolCreatorCOP

Functions
numeric::xyzVector< Real >	pep_COM (core::pose::Pose const &pose, core::Size pep_start, core::Size pep_end)

Typedef Documentation

typedef utility::pointer::shared_ptr< OopCreatorMover const > protocols::ncbb::oop::OopCreatorMoverCOP

typedef utility::pointer::shared_ptr< OopCreatorMoverCreator const > protocols::ncbb::oop::OopCreatorMoverCreatorCOP

typedef utility::pointer::shared_ptr< OopCreatorMoverCreator > protocols::ncbb::oop::OopCreatorMoverCreatorOP

typedef utility::pointer::shared_ptr< OopCreatorMover > protocols::ncbb::oop::OopCreatorMoverOP

typedef utility::pointer::shared_ptr< OopDockDesignProtocol const > protocols::ncbb::oop::OopDockDesignProtocolCOP

typedef utility::pointer::shared_ptr< OopDockDesignProtocolCreator const > protocols::ncbb::oop::OopDockDesignProtocolCreatorCOP

typedef utility::pointer::shared_ptr< OopDockDesignProtocolCreator > protocols::ncbb::oop::OopDockDesignProtocolCreatorOP

typedef utility::pointer::shared_ptr< OopDockDesignProtocol > protocols::ncbb::oop::OopDockDesignProtocolOP

Function Documentation

numeric::xyzVector< Real > protocols::ncbb::oop::pep_COM	(	core::pose::Pose const &	pose,
		core::Size	pep_start,
		core::Size	pep_end
	)

References core::chemical::aa_vrt, core::pose::Pose::residue(), and core::conformation::Atom::xyz().

Referenced by protocols::ncbb::oop::OopDockDesignProtocol::apply().