#include <JumpSetup.hh>

Inheritance diagram for protocols::jumping::JumpsFromAllPairings:

Public Member Functions
	JumpsFromAllPairings (const core::Size total_residue, core::scoring::dssp::PairingsList const &jumps, ObjexxFCL::FArray1D_float const &cut_probability)

JumpSample	create_jump_sample () const override

Public Member Functions inherited from protocols::jumping::BaseJumpSetup
	~BaseJumpSetup () override
	Automatically generated virtual destructor for class deriving directly from VirtualBase. More...

virtual core::fragment::FragSetOP	generate_jump_frags (JumpSample const &, core::kinematics::MoveMap const &mm) const
	returns an ordered FragSet that is compatible with the JumpSample default: generate jumps from ss-library according to JumpSample More...

virtual JumpSample	clean_jumps (JumpSample const &) const =0
	take from a given JumpSample only those Jumps, which could also have been created by create_jump_sample() More...

virtual std::string	type_name () const =0

Private Attributes
core::Size	total_residue_

core::scoring::dssp::PairingsList	jumps_

ObjexxFCL::FArray1D_float	cut_prob_

Constructor & Destructor Documentation

protocols::jumping::JumpsFromAllPairings::JumpsFromAllPairings	(	const core::Size	total_residue,
		core::scoring::dssp::PairingsList const &	jumps,
		ObjexxFCL::FArray1D_float const &	cut_probability
	)