AddHelixSequenceConstraintsMover.cc File Reference

This mover adds sequence constraints to the ends of each helix, requiring at least one positively-charged residue in the three C-terminal residues, and at least one negatively-charged resiude in the three N-terminal residues. More...

#include <protocols/aa_composition/AddHelixSequenceConstraintsMover.hh>
#include <protocols/aa_composition/AddHelixSequenceConstraintsMoverCreator.hh>
#include <core/pose/Pose.hh>
#include <core/select/residue_selector/ResidueSelector.hh>
#include <core/select/residue_selector/ResidueIndexSelector.hh>
#include <core/select/residue_selector/util.hh>
#include <core/scoring/aa_composition_energy/AACompositionConstraint.hh>
#include <core/scoring/constraints/Constraint.hh>
#include <protocols/aa_composition/ClearCompositionConstraintsMover.hh>
#include <protocols/aa_composition/util.hh>
#include <protocols/rosetta_scripts/util.hh>
#include <basic/Tracer.hh>
#include <utility/tag/Tag.hh>
#include <utility/string_util.hh>
#include <utility/tag/XMLSchemaGeneration.hh>
#include <protocols/moves/mover_schemas.hh>

Namespaces
	protocols
	The instance of Loops contained by AbrelaxApplication should be replaced by a LoopsOP.
	protocols::aa_composition

Functions
static basic::Tracer	TR ("protocols.aa_composition.AddHelixSequenceConstraintsMover")
std::ostream &	protocols::aa_composition::operator<< (std::ostream &os, AddHelixSequenceConstraintsMover const &mover)
	private methods /// More...

Detailed Description

This mover adds sequence constraints to the ends of each helix, requiring at least one positively-charged residue in the three C-terminal residues, and at least one negatively-charged resiude in the three N-terminal residues.

Author

Vikram K. Mulligan (vmull.nosp@m.ig@u.nosp@m.w.edu – wrote the mover)

Gabriel Rocklin (came up with the rules that this mover should apply, based on high-throughput experiments)

Function Documentation

static basic::Tracer TR ( "protocols.aa_composition.AddHelixSequenceConstraintsMover"  )

static