This is the complete list of members for protocols::ligand_docking::ga_ligand_dock::Pharmacophore, including all inherited members.

atm(core::Size i) const	protocols::ligand_docking::ga_ligand_dock::Pharmacophore	inline
atms() const	protocols::ligand_docking::ga_ligand_dock::Pharmacophore	inline
atms_	protocols::ligand_docking::ga_ligand_dock::Pharmacophore	private
com() const	protocols::ligand_docking::ga_ligand_dock::Pharmacophore	inline
com_	protocols::ligand_docking::ga_ligand_dock::Pharmacophore	private
dist() const	protocols::ligand_docking::ga_ligand_dock::Pharmacophore	inline
dist(core::Size i, core::Size j) const	protocols::ligand_docking::ga_ligand_dock::Pharmacophore	inline
dist_	protocols::ligand_docking::ga_ligand_dock::Pharmacophore	private
find_type_matches(Pharmacophore const &other, bool const just_count=false) const	protocols::ligand_docking::ga_ligand_dock::Pharmacophore
has(core::Size i) const	protocols::ligand_docking::ga_ligand_dock::Pharmacophore	inline
index() const	protocols::ligand_docking::ga_ligand_dock::Pharmacophore	inline
index_	protocols::ligand_docking::ga_ligand_dock::Pharmacophore	private
is_acceptor(core::Size i) const	protocols::ligand_docking::ga_ligand_dock::Pharmacophore	inline
is_close(utility::vector1< core::Real > const &Dcol, core::Real dcut) const	protocols::ligand_docking::ga_ligand_dock::Pharmacophore
is_donor(core::Size i) const	protocols::ligand_docking::ga_ligand_dock::Pharmacophore	inline
is_polarH(core::Size i) const	protocols::ligand_docking::ga_ligand_dock::Pharmacophore	inline
map_index() const	protocols::ligand_docking::ga_ligand_dock::Pharmacophore	inline
map_index_	protocols::ligand_docking::ga_ligand_dock::Pharmacophore	private
match(Pharmacophore const &other, utility::vector1< core::Size > const &map_index, core::Real const unmatch_score) const	protocols::ligand_docking::ga_ligand_dock::Pharmacophore
Pharmacophore()	protocols::ligand_docking::ga_ligand_dock::Pharmacophore
Pharmacophore(utility::vector1< core::Size > atmno, utility::vector1< AtomProperties > const &p, utility::vector1< utility::vector1< core::Real > > const &Dmtrx, utility::vector1< numeric::xyzVector< core::Real > > const &coords)	protocols::ligand_docking::ga_ligand_dock::Pharmacophore
props() const	protocols::ligand_docking::ga_ligand_dock::Pharmacophore	inline
props_	protocols::ligand_docking::ga_ligand_dock::Pharmacophore	private
set_map_index(utility::vector1< core::Size > map_index)	protocols::ligand_docking::ga_ligand_dock::Pharmacophore	inline
show() const	protocols::ligand_docking::ga_ligand_dock::Pharmacophore
size() const	protocols::ligand_docking::ga_ligand_dock::Pharmacophore	inline
update_com(utility::vector1< numeric::xyzVector< core::Real > > const &coords)	protocols::ligand_docking::ga_ligand_dock::Pharmacophore