SheetTopologyFilter.cc File Reference

#include <protocols/fldsgn/filters/SheetTopologyFilter.hh>
#include <protocols/fldsgn/filters/SheetTopologyFilterCreator.hh>
#include <protocols/denovo_design/components/SegmentPairing.hh>
#include <protocols/denovo_design/components/StructureData.hh>
#include <protocols/denovo_design/components/StructureDataFactory.hh>
#include <protocols/fldsgn/topology/SheetFoldTypeManager.hh>
#include <protocols/fldsgn/topology/StrandPairing.hh>
#include <protocols/fldsgn/topology/util.hh>
#include <core/conformation/Residue.hh>
#include <core/types.hh>
#include <core/pose/Pose.hh>
#include <core/scoring/dssp/Dssp.hh>
#include <core/sequence/ABEGOManager.hh>
#include <protocols/parser/BluePrint.hh>
#include <protocols/fldsgn/topology/SS_Info2.hh>
#include <basic/Tracer.hh>
#include <protocols/filters/Filter.hh>
#include <utility>
#include <utility/tag/Tag.hh>
#include <utility/vector0.hh>
#include <utility/vector1.hh>
#include <utility/tag/XMLSchemaGeneration.hh>
#include <protocols/filters/filter_schemas.hh>
#include <core/pose/PDBInfo.hh>

Namespaces
	protocols
	The instance of Loops contained by AbrelaxApplication should be replaced by a LoopsOP.
	protocols::fldsgn
	protocols::fldsgn::filters

Functions
static basic::Tracer	tr ("protocols.fldsgn.filters.SheetTopologyFilter")
core::Size	protocols::fldsgn::filters::compute_max_strand (std::string const &sheet_topology)
std::string	protocols::fldsgn::filters::remove_register_shift_single_pair (std::string const &pair_str)
	helper function for replacing register shift of a pair with 99 More...
std::string	protocols::fldsgn::filters::remove_register_shifts (std::string const &pair_str)
	helper function for replacing register shift of all pairs with 99 More...
topology::StrandPairingOP	protocols::fldsgn::filters::find_pairing (topology::StrandPairingSet &spairset, core::Size const s1, core::Size const s2)
	Searches the StrandPairingSet for a pairing containing s1 and s2. Returns OP to it. More...
core::Size	protocols::fldsgn::filters::find_pairing_idx (topology::StrandPairingSet &spairset, core::Size const s1, core::Size const s2)
	Searches the StrandPairingSet for a pairing containing s1 and s2. Returns its 1-based index. More...

Function Documentation

static basic::Tracer tr ( "protocols.fldsgn.filters.SheetTopologyFilter"  )

static

Referenced by protocols::fldsgn::filters::SheetTopologyFilter::apply(), protocols::fldsgn::filters::SheetTopologyFilter::compute(), protocols::fldsgn::filters::compute_max_strand(), protocols::fldsgn::filters::SheetTopologyFilter::compute_paired_residues(), protocols::fldsgn::filters::SheetTopologyFilter::compute_residue_pairings(), protocols::fldsgn::filters::SheetTopologyFilter::count_good_pairings(), protocols::fldsgn::filters::SheetTopologyFilter::get_secstruct(), and protocols::fldsgn::filters::SheetTopologyFilter::parse_my_tag().