Rosetta  2021.16
 All Classes Namespaces Files Functions Variables Typedefs Enumerations Enumerator Friends Macros Pages
protocols::antibody::snugdock::SnugDockProtocol Member List

This is the complete list of members for protocols::antibody::snugdock::SnugDockProtocol, including all inherited members.

ab_has_light_chain_protocols::antibody::snugdock::SnugDockProtocolprivate
ab_residues_protocols::antibody::snugdock::SnugDockProtocolprivate
ag_residues_protocols::antibody::snugdock::SnugDockProtocolprivate
antibody_info_protocols::antibody::snugdock::SnugDockProtocolprivate
apply(Pose &) overrideprotocols::antibody::snugdock::SnugDockProtocolvirtual
auto_generate_kink_constraint() const protocols::antibody::snugdock::SnugDockProtocolinline
auto_generate_kink_constraint(bool const setting)protocols::antibody::snugdock::SnugDockProtocolinline
auto_generate_kink_constraint_protocols::antibody::snugdock::SnugDockProtocolprivate
CDR_loops_protocols::antibody::snugdock::SnugDockProtocolprivate
clear_info()protocols::moves::Moverinlinevirtual
clone() const overrideprotocols::antibody::snugdock::SnugDockProtocolvirtual
constrain_vlvh_qq() const protocols::antibody::snugdock::SnugDockProtocolinline
constrain_vlvh_qq(bool const setting)protocols::antibody::snugdock::SnugDockProtocolinline
constrain_vlvh_qq_protocols::antibody::snugdock::SnugDockProtocolprivate
create()protocols::moves::Movervirtual
docking() const protocols::antibody::snugdock::SnugDockProtocolprivate
docking_protocols::antibody::snugdock::SnugDockProtocolmutableprivate
fresh_instance() const overrideprotocols::antibody::snugdock::SnugDockProtocolvirtual
get_additional_output()protocols::moves::Movervirtual
get_current_job() const protocols::moves::Mover
get_current_tag() const protocols::moves::Moverinline
get_input_pose() const protocols::moves::Mover
get_last_move_status() const protocols::moves::Mover
get_name() const overrideprotocols::antibody::snugdock::SnugDockProtocolvirtual
get_native_pose() const protocols::moves::Mover
get_self_ptr() const protocols::moves::Moverinline
get_self_ptr()protocols::moves::Moverinline
get_self_weak_ptr() const protocols::moves::Moverinline
get_self_weak_ptr()protocols::moves::Moverinline
get_type() const protocols::moves::Moverinline
high_res_kink_constraint() const protocols::antibody::snugdock::SnugDockProtocolinline
high_res_kink_constraint(bool const setting)protocols::antibody::snugdock::SnugDockProtocolinline
high_res_kink_constraint_protocols::antibody::snugdock::SnugDockProtocolprivate
info()protocols::moves::Moverinlinevirtual
info() const protocols::moves::Moverinlinevirtual
init()protocols::antibody::snugdock::SnugDockProtocolprivate
init_for_equal_operator_and_copy_constructor(SnugDockProtocol &lhs, SnugDockProtocol const &rhs)protocols::antibody::snugdock::SnugDockProtocolprivate
init_from_options()protocols::antibody::snugdock::SnugDockProtocolprivate
last_proposal_density_ratio()protocols::moves::Moverinlinevirtual
low_res_kink_constraint() const protocols::antibody::snugdock::SnugDockProtocolinline
low_res_kink_constraint(bool const setting)protocols::antibody::snugdock::SnugDockProtocolinline
low_res_kink_constraint_protocols::antibody::snugdock::SnugDockProtocolprivate
low_res_refine_cdr_h2_protocols::antibody::snugdock::SnugDockProtocolprivate
low_res_refine_cdr_h3_protocols::antibody::snugdock::SnugDockProtocolprivate
Mover()protocols::moves::Mover
Mover(std::string const &type_name)protocols::moves::Mover
name()protocols::moves::Moverinlinestatic
operator<<(std::ostream &out, SnugDockProtocol const &snugdockprotocol)protocols::antibody::snugdock::SnugDockProtocolfriend
operator=(SnugDockProtocol const &rhs)protocols::antibody::snugdock::SnugDockProtocol
parse_my_tag(TagCOP tag, basic::datacache::DataMap &data)protocols::moves::Movervirtual
pdb_info_protocols::antibody::snugdock::SnugDockProtocolprivate
place_VRT_at_residue_COM(Pose const &pose, utility::vector1< bool > residues)protocols::antibody::snugdock::SnugDockProtocol
place_VRT_at_residue_COM(Pose const &pose, core::Size start, core::Size stop)protocols::antibody::snugdock::SnugDockProtocol
Pose typedefprotocols::moves::Mover
PoseCOP typedefprotocols::moves::Mover
provide_citation_info(basic::citation_manager::CitationCollectionList &) const protocols::moves::Movervirtual
refine_loop() const protocols::antibody::snugdock::SnugDockProtocolprivate
register_options()protocols::antibody::snugdock::SnugDockProtocolstatic
reinitialize_for_each_job() const protocols::moves::Movervirtual
reinitialize_for_new_input() const overrideprotocols::antibody::snugdock::SnugDockProtocolvirtual
repack_tf_from_residue_sets(Pose const &pose, std::set< core::Size > const &ab_residues, std::set< core::Size > const &ag_residues)protocols::antibody::snugdock::SnugDockProtocol
reset_status()protocols::moves::Mover
set_current_job(protocols::jobdist::BasicJobCOP job)protocols::moves::Mover
set_current_tag(std::string const &new_tag)protocols::moves::Moverinlinevirtual
set_default()protocols::antibody::snugdock::SnugDockProtocolprivate
set_input_pose(PoseCOP pose)protocols::moves::Movervirtual
set_last_move_status(MoverStatus status)protocols::moves::Moverprotected
set_native_pose(PoseCOP pose)protocols::moves::Movervirtual
set_type(std::string const &setting)protocols::moves::Moverinline
setup_ab_ag_foldtree(Pose &pose, AntibodyInfoOP antibody_info)protocols::antibody::snugdock::SnugDockProtocol
setup_loop_refinement_movers()protocols::antibody::snugdock::SnugDockProtocolprivate
setup_objects(Pose &pose)protocols::antibody::snugdock::SnugDockProtocolprivate
show(std::ostream &out=std::cout) const overrideprotocols::antibody::snugdock::SnugDockProtocolvirtual
SnugDockProtocol()protocols::antibody::snugdock::SnugDockProtocol
SnugDockProtocol(SnugDockProtocol const &rhs)protocols::antibody::snugdock::SnugDockProtocol
Strings typedefprotocols::moves::Mover
TagCOP typedefprotocols::moves::Mover
test_move(Pose &pose)protocols::moves::Moverinlinevirtual
tf_protocols::antibody::snugdock::SnugDockProtocolprivate
type(const std::string &type_in)protocols::moves::Moverinline
type() const protocols::moves::Moverinline
update_fold_tree_from_bool_vector()protocols::antibody::snugdock::SnugDockProtocolprivate
vh_vl_jump_protocols::antibody::snugdock::SnugDockProtocolprivate
~SnugDockProtocol() overrideprotocols::antibody::snugdock::SnugDockProtocol
Generated on Fri Apr 23 2021 03:45:10 for Rosetta by   doxygen 1.8.7