protocols::kinmatch::KinFunGroupTK Class Reference

#include <FunGroupTK.hh>

Inheritance diagram for protocols::kinmatch::KinFunGroupTK:

Public Member Functions
	KinFunGroupTK (core::pose::Pose &p_in, utility::vector1< core::Size > pos=utility::vector1< core::Size >())
void	place_c (KRSQuery const &q, core::conformation::Residue const &qrsd, utility::vector1< core::conformation::ResidueOP > &hits_out) const override
void	place_h (KRSQuery const &q, core::conformation::Residue const &qrsd, utility::vector1< core::conformation::ResidueOP > &hits) const override
void	place_d (KRSQuery const &q, core::conformation::Residue const &qrsd, utility::vector1< core::conformation::ResidueOP > &hits) const override
Public Member Functions inherited from protocols::kinmatch::FunGroupTK
	~FunGroupTK () override
	Automatically generated virtual destructor for class deriving directly from VirtualBase. More...
	FunGroupTK (core::pose::Pose &p_in, utility::vector1< core::Size > &pos)
protocols::scoring::ImplicitFastClashCheck const &	ifc () const

Additional Inherited Members
Protected Attributes inherited from protocols::kinmatch::FunGroupTK
core::pose::PoseCOP	pose_
utility::vector1< core::Size > const	pos_
protocols::scoring::ImplicitFastClashCheckCOP	ifc_
std::map< std::string, utility::vector1 < core::kinematics::Stub > >	stb_
std::map< std::string, utility::vector1 < core::conformation::ResidueOP > >	rsd_
core::chemical::ResidueTypeSetCAP	frs_

Constructor & Destructor Documentation

protocols::kinmatch::KinFunGroupTK::KinFunGroupTK	(	core::pose::Pose &	p_in,
		utility::vector1< core::Size >	pos = utility::vector1<core::Size>()
	)

Member Function Documentation

void protocols::kinmatch::KinFunGroupTK::place_c ( KRSQuery const &  q, core::conformation::Residue const &  qrsd, utility::vector1< core::conformation::ResidueOP > &  hits_out  ) const

overridevirtual

Implements protocols::kinmatch::FunGroupTK.

References protocols::kinmatch::KRSQuery::angth, protocols::kinmatch::KRSQuery::axs, protocols::kinmatch::KRSQuery::cen, CYS_1oSIN_CB_SG_HG, CYS_CB_HG_DIS, CYS_CB_SG_PERP, CYS_HG_SG_PRJLEN, CYS_HG_SG_X_DROP, CYS_SG_CB_H, protocols::kinmatch::KRSQuery::disth, protocols::kinmatch::FunGroupTK::ifc(), protocols::mean_field::max(), protocols::mean_field::min(), protocols::kinmatch::KRSQuery::ori, protocols::kinmatch::FunGroupTK::pos_, protocols::kinmatch::FunGroupTK::rsd_, core::conformation::Residue::seqpos(), protocols::kinmatch::sqr(), protocols::kinmatch::FunGroupTK::stb_, and core::chemical::element::Y.

void protocols::kinmatch::KinFunGroupTK::place_d ( KRSQuery const &  q, core::conformation::Residue const &  qrsd, utility::vector1< core::conformation::ResidueOP > &  hits  ) const

overridevirtual

Implements protocols::kinmatch::FunGroupTK.

References place_h().

void protocols::kinmatch::KinFunGroupTK::place_h ( KRSQuery const &  q, core::conformation::Residue const &  qrsd, utility::vector1< core::conformation::ResidueOP > &  hits  ) const

overridevirtual

Implements protocols::kinmatch::FunGroupTK.

References protocols::kinmatch::KRSQuery::angth, protocols::kinmatch::KRSQuery::axs, protocols::kinmatch::KRSQuery::cen, protocols::kinmatch::KRSQuery::disth, HIS_1oSIN_CA_CB_CG, HIS_CB_HG_DIS, HIS_HE2_CG_PRJLEN, HIS_HE2_CG_X_DROP, protocols::kinmatch::FunGroupTK::ifc(), protocols::mean_field::max(), protocols::mean_field::min(), protocols::kinmatch::KRSQuery::ori, protocols::kinmatch::FunGroupTK::pos_, protocols::kinmatch::FunGroupTK::rsd_, core::conformation::Residue::seqpos(), protocols::kinmatch::sqr(), protocols::kinmatch::FunGroupTK::stb_, and core::chemical::element::Y.

Referenced by place_d().

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The documentation for this class was generated from the following files:

• src/protocols/kinmatch/FunGroupTK.hh
• src/protocols/kinmatch/FunGroupTK.cc