Rosetta  2021.16
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protocols::abinitio::Protocol Member List

This is the complete list of members for protocols::abinitio::Protocol, including all inherited members.

add_evaluation(evaluation::PoseEvaluatorOP ev)protocols::abinitio::Protocol
apply(core::pose::Pose &) overrideprotocols::abinitio::Protocolvirtual
BaseClass typedefprotocols::abinitio::Protocol
centroid_scorefxn()protocols::abinitio::Protocolinline
checkpoints_protocols::abinitio::Protocolprivate
clear_info()protocols::moves::Moverinlinevirtual
clone() const protocols::moves::Movervirtual
create()protocols::moves::Movervirtual
evaluate_pose(core::pose::Pose &pose, std::string tag, core::io::silent::SilentStruct &pss) const protocols::abinitio::Protocol
evaluator()protocols::abinitio::Protocolinline
evaluator_protocols::abinitio::Protocolprivate
fresh_instance() const protocols::moves::Movervirtual
fullatom_scorefxn()protocols::abinitio::Protocolinline
get_additional_output()protocols::moves::Movervirtual
get_checkpoints()protocols::abinitio::Protocolinlinevirtual
get_current_job() const protocols::moves::Mover
get_current_tag() const protocols::moves::Moverinline
get_input_pose() const protocols::moves::Mover
get_last_move_status() const protocols::moves::Mover
get_name() const overrideprotocols::abinitio::Protocolvirtual
get_native_pose() const protocols::moves::Mover
get_self_ptr() const protocols::moves::Moverinline
get_self_ptr()protocols::moves::Moverinline
get_self_weak_ptr() const protocols::moves::Moverinline
get_self_weak_ptr()protocols::moves::Moverinline
get_type() const protocols::moves::Moverinline
info()protocols::moves::Moverinlinevirtual
info() const protocols::moves::Moverinlinevirtual
init(core::pose::Pose const &)protocols::abinitio::Protocolinlinevirtual
kinematic_control_protocols::abinitio::Protocolprivate
kinematics()protocols::abinitio::Protocolinline
last_proposal_density_ratio()protocols::moves::Moverinlinevirtual
Mover()protocols::moves::Mover
Mover(std::string const &type_name)protocols::moves::Mover
name()protocols::moves::Moverinlinestatic
output_debug_structure(core::pose::Pose &pose, std::string prefix)protocols::abinitio::Protocolvirtual
parse_my_tag(TagCOP tag, basic::datacache::DataMap &data)protocols::moves::Movervirtual
Pose typedefprotocols::moves::Mover
PoseCOP typedefprotocols::moves::Mover
Protocol()protocols::abinitio::Protocol
provide_citation_info(basic::citation_manager::CitationCollectionList &) const protocols::moves::Movervirtual
register_options()protocols::abinitio::Protocolstatic
reinitialize_for_each_job() const protocols::moves::Movervirtual
reinitialize_for_new_input() const protocols::moves::Movervirtual
reset_status()protocols::moves::Mover
return_centroid() const protocols::abinitio::Protocolinlinevirtual
return_centroid(bool setting)protocols::abinitio::Protocolinlinevirtual
return_centroid_protocols::abinitio::Protocolprivate
scorefxn_centroid_protocols::abinitio::Protocolprivate
scorefxn_fa_protocols::abinitio::Protocolprivate
set_centroid_scorefxn(core::scoring::ScoreFunctionOP sfxn)protocols::abinitio::Protocolinline
set_current_job(protocols::jobdist::BasicJobCOP job)protocols::moves::Mover
set_current_tag(std::string const &new_tag)protocols::moves::Moverinlinevirtual
set_evaluation(evaluation::MetaPoseEvaluatorOP ev)protocols::abinitio::Protocol
set_fullatom_scorefxn(core::scoring::ScoreFunctionOP sfxn)protocols::abinitio::Protocolinline
set_input_pose(PoseCOP pose)protocols::moves::Movervirtual
set_kinematics(abinitio::KinematicControlOP kc)protocols::abinitio::Protocolinline
set_last_move_status(MoverStatus status)protocols::moves::Moverprotected
set_native_pose(PoseCOP pose)protocols::moves::Movervirtual
set_silentout_file_name(std::string str)protocols::abinitio::Protocolinline
set_type(std::string const &setting)protocols::moves::Moverinline
set_use_trRosetta_constraints(bool const setting)protocols::abinitio::Protocol
show(std::ostream &output=std::cout) const protocols::moves::Movervirtual
silentout_file_name_protocols::abinitio::Protocolprivate
start_from_centroid() const protocols::abinitio::Protocolinlinevirtual
Strings typedefprotocols::moves::Mover
supports_trRosetta_constraints() const protocols::abinitio::Protocolvirtual
TagCOP typedefprotocols::moves::Mover
test_move(Pose &pose)protocols::moves::Moverinlinevirtual
type(const std::string &type_in)protocols::moves::Moverinline
type() const protocols::moves::Moverinline
use_trRosetta_constraints() const protocols::abinitio::Protocolinline
use_trRosetta_constraints_protocols::abinitio::Protocolprivate
~Protocol() override=defaultprotocols::abinitio::Protocol