protocols::rotamer_recovery::RRComparer Class Reference

The comparison functionality for the rotamer recovery test. More...

#include <RRComparer.hh>

Inheritance diagram for protocols::rotamer_recovery::RRComparer:

Public Member Functions
	~RRComparer () override
	Automatically generated virtual destructor for class deriving directly from VirtualBase. More...
virtual std::string	get_name () const =0
virtual std::string	get_parameters () const =0
virtual void	set_recovery_threshold (core::Real const recovery_threshold)=0
virtual void	set_absolute_threshold (core::Real const absolute_threshold)=0
virtual bool	measure_rotamer_recovery (core::pose::Pose const &pose1, core::pose::Pose const &pose2, core::conformation::Residue const &res1, core::conformation::Residue const &res2, core::Real &score, bool &recovered)=0
virtual void	parse_attributes_from_tag (utility::tag::TagCOP tag)

Detailed Description

The comparison functionality for the rotamer recovery test.

Besides implementing the interface given in the base class RRComparer each RRComparer should have an entry in the conevience RotamerRecovery constructor so its use can be indicated by name.

Constructor & Destructor Documentation

protocols::rotamer_recovery::RRComparer::~RRComparer ( )

overridedefault

Automatically generated virtual destructor for class deriving directly from VirtualBase.

Auto-generated virtual destructor

Member Function Documentation

virtual std::string protocols::rotamer_recovery::RRComparer::get_name ( ) const

pure virtual

Implemented in protocols::rotamer_recovery::RRComparerChiDiff, protocols::rotamer_recovery::RRComparerRotBins, protocols::rotamer_recovery::RRComparerAutomorphicRMSD, and protocols::rotamer_recovery::RRComparerElecDensDiff.

virtual std::string protocols::rotamer_recovery::RRComparer::get_parameters ( ) const

pure virtual

Implemented in protocols::rotamer_recovery::RRComparerChiDiff, protocols::rotamer_recovery::RRComparerRotBins, protocols::rotamer_recovery::RRComparerAutomorphicRMSD, and protocols::rotamer_recovery::RRComparerElecDensDiff.

virtual bool protocols::rotamer_recovery::RRComparer::measure_rotamer_recovery ( core::pose::Pose const &  pose1, core::pose::Pose const &  pose2, core::conformation::Residue const &  res1, core::conformation::Residue const &  res2, core::Real &  score, bool &  recovered  )

pure virtual

Implemented in protocols::rotamer_recovery::RRComparerChiDiff, protocols::rotamer_recovery::RRComparerRotBins, protocols::rotamer_recovery::RRComparerAutomorphicRMSD, and protocols::rotamer_recovery::RRComparerElecDensDiff.

void protocols::rotamer_recovery::RRComparer::parse_attributes_from_tag ( utility::tag::TagCOP  tag )

virtual

Reimplemented in protocols::rotamer_recovery::RRComparerChiDiff, and protocols::rotamer_recovery::RRComparerRotBins.

virtual void protocols::rotamer_recovery::RRComparer::set_absolute_threshold ( core::Real const  absolute_threshold )

pure virtual

Implemented in protocols::rotamer_recovery::RRComparerChiDiff, protocols::rotamer_recovery::RRComparerRotBins, protocols::rotamer_recovery::RRComparerAutomorphicRMSD, and protocols::rotamer_recovery::RRComparerElecDensDiff.

virtual void protocols::rotamer_recovery::RRComparer::set_recovery_threshold ( core::Real const  recovery_threshold )

pure virtual

Implemented in protocols::rotamer_recovery::RRComparerChiDiff, protocols::rotamer_recovery::RRComparerRotBins, protocols::rotamer_recovery::RRComparerAutomorphicRMSD, and protocols::rotamer_recovery::RRComparerElecDensDiff.

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The documentation for this class was generated from the following files:

• src/protocols/rotamer_recovery/RRComparer.hh
• src/protocols/rotamer_recovery/RRComparer.cc