SequenceMetric.hh File Reference

A SimpleMetric to output the single-letter OR three-letter sequence of a protein or subset of positions/regions using a ResidueSelector. More...

#include <core/simple_metrics/metrics/SequenceMetric.fwd.hh>
#include <core/simple_metrics/StringMetric.hh>
#include <core/types.hh>
#include <core/select/residue_selector/ResidueSelector.fwd.hh>
#include <core/pose/Pose.fwd.hh>
#include <utility/vector1.hh>
#include <utility/tag/XMLSchemaGeneration.fwd.hh>

Classes
class	core::simple_metrics::metrics::SequenceMetric
	A SimpleMetric to output the single-letter OR three-letter sequence of a protein or subset of positions/regions using a ResidueSelector. More...

Namespaces
	core
	A class for reading in the atom type properties.
	core::simple_metrics
	core::simple_metrics::metrics

Enumerations
enum	core::simple_metrics::metrics::SequenceMetricMode {   core::simple_metrics::metrics::SMM_ONELETTER_CODE =1, core::simple_metrics::metrics::SMM_THREELETTER_CODE, core::simple_metrics::metrics::SMM_BASE_NAME, core::simple_metrics::metrics::SMM_FULL_NAME,   core::simple_metrics::metrics::SMM_INVALID_MODE, core::simple_metrics::metrics::SMM_END_OF_LIST = SMM_INVALID_MODE }
	The mode for this metric. If you add to this list, be sure to update the map associating this enum with corresponding strings in the .cc file. More...

Detailed Description

A SimpleMetric to output the single-letter OR three-letter sequence of a protein or subset of positions/regions using a ResidueSelector.

Author

Jared Adolf-Bryfogle (jadol.nosp@m.fbr@.nosp@m.gmail.nosp@m..com)

Vikram K. Mulligan (vmull.nosp@m.igan.nosp@m.@flat.nosp@m.iron.nosp@m.insti.nosp@m.tute.nosp@m..org) – Added support for writing full residue type names or basenames.