util.cc File Reference

#include <protocols/ligand_docking/GALigandDock/util.hh>
#include <core/chemical/AA.hh>
#include <core/scoring/Energies.hh>
#include <core/pose/Pose.hh>
#include <core/conformation/Residue.hh>
#include <core/scoring/EnergyGraph.hh>
#include <core/scoring/TwelveANeighborGraph.hh>
#include <core/types.hh>
#include <basic/Tracer.hh>
#include <utility/vector1.hh>

Namespaces
	protocols
	The instance of Loops contained by AbrelaxApplication should be replaced by a LoopsOP.
	protocols::ligand_docking
	protocols::ligand_docking::ga_ligand_dock

Functions
static basic::Tracer	protocols::ligand_docking::ga_ligand_dock::TR ("protocols.ligand_docking.GALigandDock")
core::Size	protocols::ligand_docking::ga_ligand_dock::count_neighbors_on_coord (core::pose::Pose const &pose, core::Vector const &xyz1, std::string const atomname, core::Real const dcut)
utility::vector1< core::Size >	protocols::ligand_docking::ga_ligand_dock::count_neighbors (core::pose::Pose const &pose, std::string const atomname, core::Real const dcut)
utility::vector1< core::Size >	protocols::ligand_docking::ga_ligand_dock::get_atomic_contacting_sidechains (core::pose::Pose const &pose, utility::vector1< core::Size > const &ligids, core::Real const atomic_distance_cut)