StepWiseRNA_Clusterer.cc File Reference

#include <protocols/stepwise/legacy/modeler/rna/StepWiseRNA_Clusterer.hh>
#include <protocols/stepwise/modeler/rna/StepWiseRNA_OutputData.hh>
#include <protocols/stepwise/modeler/working_parameters/StepWiseWorkingParameters.hh>
#include <protocols/stepwise/modeler/rna/util.hh>
#include <protocols/stepwise/legacy/modeler/rna/util.hh>
#include <protocols/stepwise/legacy/modeler/rna/StepWiseRNA_PoseSetup.fwd.hh>
#include <protocols/stepwise/legacy/modeler/rna/StepWiseRNA_PoseSetup.hh>
#include <protocols/stepwise/modeler/output_util.hh>
#include <core/types.hh>
#include <core/pose/Pose.hh>
#include <core/pose/util.hh>
#include <core/pose/extra_pose_info_util.hh>
#include <core/pose/rna/util.hh>
#include <core/scoring/Energies.hh>
#include <core/scoring/ScoreFunction.hh>
#include <core/chemical/ResidueTypeSet.hh>
#include <core/chemical/ChemicalManager.hh>
#include <core/chemical/rna/util.hh>
#include <core/io/silent/SilentStruct.hh>
#include <core/io/silent/SilentFileData.hh>
#include <core/io/silent/SilentFileOptions.hh>
#include <core/import_pose/pose_stream/PoseInputStream.hh>
#include <core/import_pose/pose_stream/PoseInputStream.fwd.hh>
#include <core/import_pose/pose_stream/SilentFilePoseInputStream.hh>
#include <core/scoring/ScoreFunctionFactory.hh>
#include <core/scoring/rms_util.hh>
#include <core/scoring/rms_util.tmpl.hh>
#include <basic/datacache/BasicDataCache.hh>
#include <basic/datacache/CacheableString.hh>
#include <basic/Tracer.hh>
#include <utility/vector1.hh>
#include <utility/tools/make_vector1.hh>
#include <utility/file/FileName.hh>
#include <core/io/silent/SilentFileData.fwd.hh>
#include <core/io/silent/BinarySilentStruct.hh>
#include <ObjexxFCL/format.hh>
#include <ObjexxFCL/string.functions.hh>
#include <list>
#include <ctime>

Namespaces
	protocols
	The instance of Loops contained by AbrelaxApplication should be replaced by a LoopsOP.
	protocols::stepwise
	protocols::stepwise::legacy
	protocols::stepwise::legacy::modeler
	protocols::stepwise::legacy::modeler::rna

Functions
static basic::Tracer	TR ("protocols.stepwise.legacy.modeler.rna.StepWiseRNA_Clusterer")

Function Documentation

static basic::Tracer TR ( "protocols.stepwise.legacy.modeler.rna.StepWiseRNA_Clusterer"  )

static