Rosetta: core::chemical::sdf::CtabV2000Parser Class Reference

#include <CtabV2000Parser.hh>

Inheritance diagram for core::chemical::sdf::CtabV2000Parser:

Inheritance graph

Public Member Functions
	~CtabV2000Parser () override

bool	parse (std::istream &tablein, std::string const &headerline, MolFileIOMolecule &molecule) override

Public Member Functions inherited from core::chemical::sdf::CtabParserBase
	CtabParserBase ()

virtual	~CtabParserBase ()

Private Member Functions
virtual bool	parse_atom_line (std::string line, MolFileIOAtom &atom)

virtual bool	parse_bond_line (std::string line, MolFileIOBond &bond)

virtual bool	parse_property_line (std::string line, MolFileIOMolecule &mol)

Constructor & Destructor Documentation

core::chemical::sdf::CtabV2000Parser::~CtabV2000Parser ( )

inlineoverride

Member Function Documentation

bool core::chemical::sdf::CtabV2000Parser::parse	(	std::istream &	tablein,
		std::string const &	headerline,
		MolFileIOMolecule &	molecule
	)

overridevirtual

Implements core::chemical::sdf::CtabParserBase.

References protocols::cluster::calibur::aa, core::chemical::sdf::MolFileIOMolecule::add_atom(), core::chemical::sdf::MolFileIOMolecule::add_bond(), parse_atom_line(), parse_bond_line(), parse_property_line(), and core::chemical::sdf::TR().

Referenced by core::chemical::sdf::SDFParser::parse().

bool core::chemical::sdf::CtabV2000Parser::parse_atom_line	(	std::string	line,
		MolFileIOAtom &	atom
	)

privatevirtual

References core::chemical::sdf::MolFileIOAtom::element(), core::chemical::sdf::MolFileIOAtom::position(), and core::chemical::sdf::TR().

Referenced by parse().

bool core::chemical::sdf::CtabV2000Parser::parse_bond_line	(	std::string	line,
		MolFileIOBond &	bond
	)

privatevirtual

References core::chemical::sdf::MolFileIOBond::atom1(), core::chemical::sdf::MolFileIOBond::atom2(), core::chemical::sdf::MolFileIOBond::sdf_type(), and core::chemical::sdf::TR().

Referenced by parse().

bool core::chemical::sdf::CtabV2000Parser::parse_property_line	(	std::string	line,
		MolFileIOMolecule &	mol
	)

privatevirtual

References core::chemical::sdf::MolFileIOMolecule::atom_index(), and core::chemical::sdf::TR().

Referenced by parse().

The documentation for this class was generated from the following files:

src/core/chemical/sdf/CtabV2000Parser.hh
src/core/chemical/sdf/CtabV2000Parser.cc