| add_schema(utility::tag::XMLSchemaComplexTypeGeneratorOP complex_schema) | core::simple_metrics::PerResidueRealMetric | static |
| apply(std::string const &out_label, pose::Pose &pose, bool override_existing_data=false) const override | core::simple_metrics::PerResidueRealMetric | virtual |
| core::simple_metrics::SimpleMetric::apply(pose::Pose &pose, std::string const &prefix="", std::string const &suffix="", bool override_existing_data=false) const | core::simple_metrics::SimpleMetric | |
| cached_calculate(pose::Pose const &pose, bool use_cache, std::string prefix="", std::string suffix="", bool fail_on_missing_cache=true, bool use_ref_pose_for_cache=true) const | core::simple_metrics::PerResidueRealMetric | |
| calculate(core::pose::Pose const &pose) const override | core::simple_metrics::per_residue_metrics::WaterMediatedHbondMetric | virtual |
| clone() const override | core::simple_metrics::per_residue_metrics::WaterMediatedHbondMetric | virtual |
| complex_type_generator_for_simple_metric(utility::tag::XMLSchemaDefinition &) | core::simple_metrics::SimpleMetric | static |
| depth_ | core::simple_metrics::per_residue_metrics::WaterMediatedHbondMetric | private |
| find_hb_paths(core::scoring::hbonds::HBondSet const &local_hb_set, utility::vector1< core::Size > const &local_waters, std::map< std::string, core::Size > &paths, core::Size const current_res, core::Size const max_depth=1, std::string const ¤t_path="", core::Size const current_depth=0, core::scoring::hbonds::HBondCOP prev_hb=nullptr) const | core::simple_metrics::per_residue_metrics::WaterMediatedHbondMetric | |
| get_custom_type() const | core::simple_metrics::SimpleMetric | |
| get_final_sm_type() const | core::simple_metrics::SimpleMetric | |
| get_metric_names() const override | core::simple_metrics::PerResidueRealMetric | virtual |
| get_selector() const | core::simple_metrics::PerResidueRealMetric | |
| include_only_set_depth_ | core::simple_metrics::per_residue_metrics::WaterMediatedHbondMetric | private |
| include_self_ | core::simple_metrics::per_residue_metrics::WaterMediatedHbondMetric | private |
| include_virt_waters_ | core::simple_metrics::per_residue_metrics::WaterMediatedHbondMetric | private |
| metric() const override | core::simple_metrics::per_residue_metrics::WaterMediatedHbondMetric | virtual |
| name() const override | core::simple_metrics::per_residue_metrics::WaterMediatedHbondMetric | virtual |
| name_static() | core::simple_metrics::per_residue_metrics::WaterMediatedHbondMetric | static |
| operator=(PerResidueRealMetric const &) | core::simple_metrics::PerResidueRealMetric | |
| core::simple_metrics::SimpleMetric::operator=(SimpleMetric const &) | core::simple_metrics::SimpleMetric | |
| parse_base_tag(utility::tag::TagCOP tag) | core::simple_metrics::SimpleMetric | virtual |
| parse_my_tag(utility::tag::TagCOP tag, basic::datacache::DataMap &data) override | core::simple_metrics::per_residue_metrics::WaterMediatedHbondMetric | virtual |
| parse_per_residue_tag(utility::tag::TagCOP tag, basic::datacache::DataMap &data) | core::simple_metrics::PerResidueRealMetric | virtual |
| PerResidueRealMetric() | core::simple_metrics::PerResidueRealMetric | |
| PerResidueRealMetric(PerResidueRealMetric const &other) | core::simple_metrics::PerResidueRealMetric | |
| provide_citation_info(basic::citation_manager::CitationCollectionList &) const | core::simple_metrics::SimpleMetric | virtual |
| provide_xml_schema(utility::tag::XMLSchemaDefinition &xsd) | core::simple_metrics::per_residue_metrics::WaterMediatedHbondMetric | static |
| selector_two_ | core::simple_metrics::per_residue_metrics::WaterMediatedHbondMetric | private |
| set_custom_type(std::string const &custom_type) | core::simple_metrics::SimpleMetric | |
| set_depth(core::Size const depth) | core::simple_metrics::per_residue_metrics::WaterMediatedHbondMetric | |
| set_include_only_set_depth(bool include_only_depth) | core::simple_metrics::per_residue_metrics::WaterMediatedHbondMetric | |
| set_include_self(bool include_self) | core::simple_metrics::per_residue_metrics::WaterMediatedHbondMetric | |
| set_include_virt_waters(bool include_virt_waters) | core::simple_metrics::per_residue_metrics::WaterMediatedHbondMetric | |
| set_output_as_pdb_nums(bool output_as_pdb_nums) | core::simple_metrics::PerResidueRealMetric | |
| set_residue_selector(select::residue_selector::ResidueSelectorCOP selector) | core::simple_metrics::PerResidueRealMetric | |
| set_residue_selector2(core::select::residue_selector::ResidueSelectorCOP selector) | core::simple_metrics::per_residue_metrics::WaterMediatedHbondMetric | |
| simple_metric_type() const | core::simple_metrics::SimpleMetric | inline |
| SimpleMetric(std::string const &simple_metric_type) | core::simple_metrics::SimpleMetric | |
| SimpleMetric(SimpleMetric const &other) | core::simple_metrics::SimpleMetric | |
| WaterMediatedHbondMetric() | core::simple_metrics::per_residue_metrics::WaterMediatedHbondMetric | |
| WaterMediatedHbondMetric(WaterMediatedHbondMetric const &src) | core::simple_metrics::per_residue_metrics::WaterMediatedHbondMetric | |
| ~PerResidueRealMetric() override | core::simple_metrics::PerResidueRealMetric | |
| ~SimpleMetric() override | core::simple_metrics::SimpleMetric | |
| ~WaterMediatedHbondMetric() override | core::simple_metrics::per_residue_metrics::WaterMediatedHbondMetric | |
1.8.7