P_AA_ABEGO3.cc File Reference

Amino acid probability given an ABEGO (ramachandran bins) triplet/sequence, arrays and functions. More...

#include <core/scoring/P_AA_ABEGO3.hh>
#include <basic/Tracer.hh>
#include <basic/database/open.hh>
#include <basic/options/option.hh>
#include <basic/options/keys/score.OptionKeys.gen.hh>
#include <basic/options/keys/corrections.OptionKeys.gen.hh>
#include <basic/options/keys/OptionKeys.hh>
#include <core/conformation/Residue.hh>
#include <ObjexxFCL/format.hh>
#include <utility/io/izstream.hh>
#include <utility/assert.hh>
#include <utility/vector0.hh>
#include <utility/vector1.hh>
#include <fstream>

Namespaces
	core
	A class for reading in the atom type properties.
	core::scoring

Macros
#define	ABEGO_COUNT   5
#define	KEY_COUNT   (ABEGO_COUNT * ABEGO_COUNT * ABEGO_COUNT * core::chemical::AA::num_canonical_aas)

Enumerations
enum	core::scoring::ABEGO_index {   core::scoring::ABEGO_index_INVALID =0, core::scoring::ABEGO_index_A, core::scoring::ABEGO_index_START = ABEGO_index_A, core::scoring::ABEGO_index_B,   core::scoring::ABEGO_index_E, core::scoring::ABEGO_index_G, core::scoring::ABEGO_index_O, core::scoring::ABEGO_index_COUNT = ABEGO_index_O }

Functions
static basic::Tracer	TR ("core.scoring.P_AA_ABEGO3")
ABEGO_index	core::scoring::abego_to_index (char abego)
int	core::scoring::abego3aa_to_index (const char abego1, const char abego2, const char abego3, const core::chemical::AA aa_index)
int	core::scoring::abego3aa_to_index (const char abego1, const char abego2, const char abego3, const char aa)

Detailed Description

Amino acid probability given an ABEGO (ramachandran bins) triplet/sequence, arrays and functions.

Author

imv@u.nosp@m.w.ed.nosp@m.u

Macro Definition Documentation

#define ABEGO_COUNT   5

#define KEY_COUNT   (ABEGO_COUNT * ABEGO_COUNT * ABEGO_COUNT * core::chemical::AA::num_canonical_aas)

Referenced by core::scoring::P_AA_ABEGO3::read_P_AA_ABEGO3().

Function Documentation

static basic::Tracer TR ( "core.scoring.P_AA_ABEGO3"  )

static