core::pack::interaction_graph::DensePDNode Member List

This is the complete list of members for core::pack::interaction_graph::DensePDNode, including all inherited members.

acknowledge_neighbors_state_substitution(int edge_to_altered_neighbor, core::PackerEnergy new_edge_energy, int other_node_new_state)	core::pack::interaction_graph::DensePDNode	inline
add_edge(EdgeBase *edge_ptr)	core::pack::interaction_graph::NodeBase
add_to_one_body_energies(ObjexxFCL::FArray1< core::PackerEnergy > &energies) override	core::pack::interaction_graph::DensePDNode	virtual
add_to_one_body_energy(int state, core::PackerEnergy energy) override	core::pack::interaction_graph::DensePDNode	virtual
alternate_state_	core::pack::interaction_graph::DensePDNode	private
alternate_state_is_being_considered_	core::pack::interaction_graph::DensePDNode	private
alternate_state_one_body_energy_	core::pack::interaction_graph::DensePDNode	private
alternate_state_total_energy_	core::pack::interaction_graph::DensePDNode	private
alternate_state_two_body_energies_	core::pack::interaction_graph::DensePDNode	private
assign_state(int new_state)	core::pack::interaction_graph::DensePDNode
assign_zero_state() override	core::pack::interaction_graph::DensePDNode	virtual
calc_deltaEpd(int alternate_state)	core::pack::interaction_graph::DensePDNode	protected
commit_considered_substitution()	core::pack::interaction_graph::DensePDNode
considering_alternate_state() const	core::pack::interaction_graph::DensePDNode	inlineprotected
count_dynamic_memory() const override	core::pack::interaction_graph::DensePDNode	virtual
count_static_memory() const override	core::pack::interaction_graph::DensePDNode	virtual
curr_state_one_body_energy_	core::pack::interaction_graph::DensePDNode	private
curr_state_total_energy_	core::pack::interaction_graph::DensePDNode	private
curr_state_two_body_energies_	core::pack::interaction_graph::DensePDNode	private
current_state_	core::pack::interaction_graph::DensePDNode	private
DensePDNode(InteractionGraphBase *owner, int node_id, int num_states)	core::pack::interaction_graph::DensePDNode
DensePDNode()	core::pack::interaction_graph::DensePDNode	private
DensePDNode(DensePDNode const &)	core::pack::interaction_graph::DensePDNode	private
depth_first_connected_component_counting()	core::pack::interaction_graph::NodeBase
drop_all_edges()	core::pack::interaction_graph::NodeBase
drop_edge(std::list< EdgeBase * >::iterator edge_iterator)	core::pack::interaction_graph::NodeBase
edge_list_begin()	core::pack::interaction_graph::NodeBase
edge_list_end()	core::pack::interaction_graph::NodeBase
edge_matrix_ptrs_	core::pack::interaction_graph::DensePDNode	private
find_edge(int other_node_index) const	core::pack::interaction_graph::NodeBase
FixedBBNode(InteractionGraphBase *owner, int node_id, int num_states)	core::pack::interaction_graph::FixedBBNode	inline
get_adjacent_dpd_node(int index)	core::pack::interaction_graph::DensePDNode	inlineprivate
get_adjacent_dpd_node(int index) const	core::pack::interaction_graph::DensePDNode	inlineprivate
get_adjacent_node(int index) const	core::pack::interaction_graph::NodeBase	inline
get_adjacent_node(int index)	core::pack::interaction_graph::NodeBase	inline
get_alt_pd_energy_total() const	core::pack::interaction_graph::DensePDNode	inlineprotected
get_alternate_state() const	core::pack::interaction_graph::DensePDNode	inlineprotected
get_curr_pd_energy_total() const	core::pack::interaction_graph::DensePDNode	inlineprotected
get_current_state() const	core::pack::interaction_graph::DensePDNode
get_dpdig_owner()	core::pack::interaction_graph::DensePDNode	inlineprivate
get_dpdig_owner() const	core::pack::interaction_graph::DensePDNode	inlineprivate
get_edge_vector_up_to_date() const	core::pack::interaction_graph::NodeBase	inlineprotected
get_incident_dpd_edge(int index)	core::pack::interaction_graph::DensePDNode	inlineprivate
get_incident_dpd_edge(int index) const	core::pack::interaction_graph::DensePDNode	inlineprivate
get_incident_edge(int index) const	core::pack::interaction_graph::NodeBase	inline
get_incident_edge(int index)	core::pack::interaction_graph::NodeBase	inline
get_index_of_adjacent_node(int index) const	core::pack::interaction_graph::NodeBase	inline
get_node_index() const	core::pack::interaction_graph::NodeBase	inline
get_num_edges_to_larger_indexed_nodes() const	core::pack::interaction_graph::NodeBase	inline
get_num_edges_to_smaller_indexed_nodes() const	core::pack::interaction_graph::NodeBase	inline
get_num_incident_edges() const	core::pack::interaction_graph::NodeBase	inline
get_num_states() const	core::pack::interaction_graph::NodeBase
get_one_body_energy(int state) const override	core::pack::interaction_graph::DensePDNode	virtual
get_one_body_energy_current_state() const	core::pack::interaction_graph::DensePDNode
get_owner() const	core::pack::interaction_graph::NodeBase	inlineprotected
get_owner()	core::pack::interaction_graph::NodeBase	inlineprotected
neighbors_curr_state_	core::pack::interaction_graph::DensePDNode	private
NodeBase(InteractionGraphBase *, int node_id, int num_states)	core::pack::interaction_graph::NodeBase
one_body_energies_	core::pack::interaction_graph::DensePDNode	private
operator=(DensePDNode const &)	core::pack::interaction_graph::DensePDNode	private
PrecomputedPairEnergiesNode(InteractionGraphBase *owner, int node_id, int num_states)	core::pack::interaction_graph::PrecomputedPairEnergiesNode	inline
prepare_for_simulated_annealing() override	core::pack::interaction_graph::DensePDNode	virtual
print() const override	core::pack::interaction_graph::DensePDNode	virtual
print_internal_energies() const	core::pack::interaction_graph::DensePDNode
project_deltaE_for_substitution(int alternate_state, core::PackerEnergy &prev_node_energy)	core::pack::interaction_graph::DensePDNode	inline
set_alternate_state(int alt)	core::pack::interaction_graph::DensePDNode	inlineprotected
state_unassigned() const override	core::pack::interaction_graph::DensePDNode	inlinevirtual
update_edge_vector()	core::pack::interaction_graph::NodeBase	protected
update_internal_energy_sums()	core::pack::interaction_graph::DensePDNode
update_internal_vectors()	core::pack::interaction_graph::DensePDNode	protected
update_one_body_energies(ObjexxFCL::FArray1< core::PackerEnergy > &energies)	core::pack::interaction_graph::DensePDNode	virtual
update_one_body_energy(int state, core::PackerEnergy energy) override	core::pack::interaction_graph::DensePDNode	virtual
zero_one_body_energies() override	core::pack::interaction_graph::DensePDNode	virtual
~DensePDNode() override	core::pack::interaction_graph::DensePDNode
~FixedBBNode() override	core::pack::interaction_graph::FixedBBNode	inline
~NodeBase()	core::pack::interaction_graph::NodeBase	virtual
~PrecomputedPairEnergiesNode() override	core::pack::interaction_graph::PrecomputedPairEnergiesNode	inline