StepWiseRNA_ResidueInfo.cc File Reference

#include <protocols/stepwise/modeler/rna/util.hh>
#include <protocols/stepwise/modeler/rna/StepWiseRNA_ResidueInfo.hh>
#include <ObjexxFCL/format.hh>
#include <ObjexxFCL/string.functions.hh>
#include <core/pose/Pose.fwd.hh>
#include <core/pose/Pose.hh>
#include <core/chemical/AtomType.hh>
#include <string>
#include <core/conformation/Residue.hh>
#include <core/conformation/Conformation.hh>
#include <basic/Tracer.hh>
#include <iostream>
#include <fstream>
#include <sstream>
#include <utility/vector1.hh>
#include <map>

Namespaces
	protocols
	The instance of Loops contained by AbrelaxApplication should be replaced by a LoopsOP.
	protocols::stepwise
	protocols::stepwise::modeler
	protocols::stepwise::modeler::rna

Functions
static basic::Tracer	TR ("protocols.stepwise.modeler.rna.StepWiseRNA_ResidueInfo")
void	protocols::stepwise::modeler::rna::print_torsion_info (core::pose::Pose const &pose, core::Size const seq_num, core::Size const rna_torsion_number, std::string const &type)
void	protocols::stepwise::modeler::rna::output_res_map (std::map< core::Size, core::Size > const &my_map, core::Size const max_seq_num)
utility::vector1< Residue_info >	protocols::stepwise::modeler::rna::get_copy_dofs_from_fasta (std::string const &full_fasta_sequence)
bool	protocols::stepwise::modeler::rna::contain_residue_at_seq_num (core::Size seq_num, utility::vector1< Residue_info > const &copy_dofs)
utility::vector1 < utility::vector1 < Residue_info > >	protocols::stepwise::modeler::rna::create_strand_list (utility::vector1< Residue_info > const &copy_dofs)
utility::vector1< Residue_info >	protocols::stepwise::modeler::rna::set_difference (utility::vector1< Residue_info > const &copy_dofs_1, utility::vector1< Residue_info > const &copy_dofs_2)
utility::vector1< Residue_info >	protocols::stepwise::modeler::rna::set_union (utility::vector1< Residue_info > const &copy_dofs_1, utility::vector1< Residue_info > const &copy_dofs_2)
bool	protocols::stepwise::modeler::rna::copy_dofs_sort_criterion (Residue_info residue_info_1, Residue_info residue_info_2)
void	protocols::stepwise::modeler::rna::sort_copy_dofs (utility::vector1< Residue_info > &copy_dofs)

Function Documentation

static basic::Tracer TR ( "protocols.stepwise.modeler.rna.StepWiseRNA_ResidueInfo"  )

static

Referenced by protocols::stepwise::modeler::rna::output_res_map(), and protocols::stepwise::modeler::rna::print_torsion_info().